Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0529 ATGCATATCTATACTCCTTCCTTGTTAGTTGAGATCTTCGATTCTGCAAAACTAGTGCATTCGCTGCTTTCAAAGAGAGCTGGTTTTATTATTGGTTATCGTCCCAGTCAAGTGCTAGGAGTCCGCCACCCCCAACCTCAACTGGGAGCTAAAACGAGCTTCGAAGTGACATTCAATTATGAAATCTTGACGCCTGATTCTACCATCGTTTCCGAGTTTAAGATGGGGTGTGATTTTTCCAAGATCTCAGCATGCTGCTCGGGTGCAGAGCAAAGTGGTCCAGTTCCTGAAGCAAACATTGATGAAAATGAAGAGAATCATGGGGCCACTGATGTGCCATCGTTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCTGTCGAGAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGAAAACTAGAAAATCAAACTCGAATTGCTGTCAAGCGGTTCCATAGATCAGCCTGGCCTGATGCTCGACAATTTTCGGAAGAAGCCAGGGCTGTTGGACATCTAAGGAACGAAAGATTGGCAAATCTACTTGGATGTTGCAGTGATGGTGATGAGAGGTTACTTGTGGCAGAATATATGCCTAATGATACTTTGGCAAAGCATTTGTTCCACTGGGAAACTCAGCCCATGAAATGGGCAATGAGACTAAGAGTTGCTTTATACCTTGCCCAAGCGCTAGAATATTGTACTAGCAAAGGGCGTGCACTATATCATGATCTAAATGCATATAGAGTACTTTTTGATGATGAAGGAAATCCTAGGCTCTCATGCTTTGGTTTGATGAAAAACAGTCGGGATGGTAAAAGTTATAGTACAAACCTGGCCTTTACCCCGCCTGAGTATTTAAGGACAGGTAGAGTTACTCCTGAAAGTGTAACATATAGTTTTGGAACCCTTTTGCTCGACCTTCTCAGCGGAAAACATATTCCTCCAAGCCATGCACTTGACCTGATTCGAGACAGGAACCTTCAAATGCTGACAGATTCTTGTTTAGAAGGACAATTTTCAAATGATGAGGGGACTGAATTAGTGCGCTTAGCCTCACGATGTTTACAATCAGAACCACGGGAGCGTCCTTATCCAAAGTCATTAGTTTCTGCTTTAATACCCCTACAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCGCACGGCACAAATGCTTTACCCCTGTCACCATTTGGTGAGGCATGTCTAAGAATGGATTTGACCGCCATCCATGAGGTCCTTGAAAAACTTGGGTATAAAGATGACGAGGGTGCTGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAGGGCGATTCTTCTTTTCGTCATAAAAACTTCAAAGCTGCAATTGATAGCTATACTCAGTTCATAGATGTTGGAACTATGATTTCTCCTACTATTTATGCACGCCGCAGTCTGTCTTATCTCATGAACAACATGCCAGAAGAAGCACTGAAGGATGCATTGCAGGCACAGATAGTTTCTCCTGTTTGGTATATAGCTTCCTACTTACAAGCTGTGGCACTTCTTGCATTGGGCAGGGAAAATGAGGCCCAGGCGGCACTCAGAGAGGCTTCTTCACTTGAAAGTAAAAAGAACACAAATTAA 1686 0.4288 MHIYTPSLLVEIFDSAKLVHSLLSKRAGFIIGYRPSQVLGVRHPQPQLGAKTSFEVTFNYEILTPDSTIVSEFKMGCDFSKISACCSGAEQSGPVPEANIDENEENHGATDVPSFQEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQTRIAVKRFHRSAWPDARQFSEEARAVGHLRNERLANLLGCCSDGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPYPKSLVSALIPLQKDSEVPSHVLMGIPHGTNALPLSPFGEACLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSSFRHKNFKAAIDSYTQFIDVGTMISPTIYARRSLSYLMNNMPEEALKDALQAQIVSPVWYIASYLQAVALLALGRENEAQAALREASSLESKKNTN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0529 561 FunFam probable serine/threonine-protein kinase At5g41260 210 401 - -
Lele49g0529 561 FunFam probable serine/threonine-protein kinase At4g35230 454 561 - -
Lele49g0529 561 ProSiteProfiles Protein kinase domain profile. 133 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0529 561 SUPERFAMILY TPR-like 460 556 IPR011990 GO:0005515
Lele49g0529 561 Gene3D Phosphorylase Kinase; domain 1 103 208 - -
Lele49g0529 561 FunFam probable serine/threonine-protein kinase At4g35230 105 208 - -
Lele49g0529 561 SUPERFAMILY Protein kinase-like (PK-like) 108 394 IPR011009 -
Lele49g0529 561 Pfam Protein tyrosine and serine/threonine kinase 146 383 IPR001245 GO:0004672|GO:0006468
Lele49g0529 561 Gene3D Transferase(Phosphotransferase) domain 1 210 401 - -
Lele49g0529 561 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 97 559 IPR045845 GO:0004672|GO:0009742
Lele49g0529 561 Gene3D Tetratricopeptide repeat domain 450 561 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0529 Lele-ChrLele49 3155839 3162167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0529 103 384 Glycoside Hydrolase AT3G07070 34.194 1.71e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele49g0529 PK_Tyr_Ser-Thr 8.2e-26 CL0016