Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0520 ATGAAATGCAGGCACGGCAAACGAATATTAAACAGTGACGTCGTGCAGCGTAAACGTATACAAGAGCCAATGAGCTTTACTTTGACGACGTTGCATATTCCTCCGGAAGATTATATTCTGCTCCGCGCCGCCCTGCAAATTCCACATTCTGACGACACTCTCTTATCTTATCACAATCTTTATTATGTGCTTCGAATGCCTATTGTAATGGCTTCTTTGTTCTTGTCGTTGATTTTGGTTTCTGTTTTGTTATCGTTTCATGCAGAAACAGTGAGATGTAATACACCCTCCTCCGACGATAACACCCCGAGTTCATCAGTGTCTTCTTCCACAAACTGCTCGTCGTCGAATCACCGTCACAAGTGGATGGGGCCTATCGGTTACCGTATAATCACCGTGGACGTGAACGGCACCGGCCAATTCAGATCTGTGCAGGCCGCAGTCGATGCTGTCCCAGACAATAATCGAATGAACGTCGTCATTAATATTAGCACTGGATACTACAAAGAGAAGGTGGTGGTGCCGGCGACGAAACCATACATAACGTTTCAGGGAGCGGGGAGGGAAGTGACGGTGATAGAATGGCATGACAGAGCCAGTGACCCTGGTCCCAATGGACAACAGCTACGTACTTACAGAACTGCTTCTGTTACAGTCTTCGCCAACTATTTCTCTGCCAGGAATATCAGCTTTAAGAACACGGCGCCGGCACCGATGCCGGGAATGCAGGGATGGCAAGCGGCGGCGTTTAGGATATCGGGGGACAAGGCGTATTTCTCAGGATGCGGCTTCTACGGAGCACAAGACACTCTTTGTGACGACGCCGGCCGCCATTATTTCAAGGACTGCTACATCGAAGGTTCCATCGATTTCATCTTCGGGAACGGTCGTTCCATGTATAAGGATTGTGTGGTGCACTCGATAGCGACGAAATTCGGGTCGATAGCAGCCCACAAGAGAAAACACGTTGACGAGAAGACTGGCTTCACGTTCGTACGGTGCAGGGTGACGGGTACGGGCCCGCTCTATGTGGGCCGGGCATTAGGCCAGTACTCGAGAATCGTCTACGCTTATACGTATTTCGATGACATAGTTGCACAAGAAGGTTGGGACGACTGGAACCATGTGGACAACAAAAACAAGACTGTGTTCTTCGGAGTGTACAAGTGCCGGGGACCAGGAGCGGCGGCGGCGAGTGGGGCGTCTTTGGCCCGTGAGCTTGACTTTGAATCCGCCCATCCATTTCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATTGCACCTTCTGATGCTTAA 1299 0.5019 MKCRHGKRILNSDVVQRKRIQEPMSFTLTTLHIPPEDYILLRAALQIPHSDDTLLSYHNLYYVLRMPIVMASLFLSLILVSVLLSFHAETVRCNTPSSDDNTPSSSVSSSTNCSSSNHRHKWMGPIGYRIITVDVNGTGQFRSVQAAVDAVPDNNRMNVVINISTGYYKEKVVVPATKPYITFQGAGREVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVVHSIATKFGSIAAHKRKHVDEKTGFTFVRCRVTGTGPLYVGRALGQYSRIVYAYTYFDDIVAQEGWDDWNHVDNKNKTVFFGVYKCRGPGAAAASGASLARELDFESAHPFLVKSFVNGRHWIAPSDA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0520 432 Gene3D - 129 431 IPR012334 -
Lele49g0520 432 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 124 428 - -
Lele49g0520 432 FunFam Pectinesterase 127 429 - -
Lele49g0520 432 MobiDBLite consensus disorder prediction 94 118 - -
Lele49g0520 432 Pfam Pectinesterase 131 423 IPR000070 GO:0030599|GO:0042545
Lele49g0520 432 SUPERFAMILY Pectin lyase-like 129 429 IPR011050 -
Lele49g0520 432 ProSitePatterns Pectinesterase signature 2. 285 294 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0520 Lele-ChrLele49 3111581 3114003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0520 77 432 Carbohydrate Esterase AT5G47500 71.667 0.0 536