Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0502 ATGGATTCCACCACAAACGTACCGCTCCAAAGGCCAAACTTTGGGCACAACAAGGCGGCTGGTATAAAAACTTTGGGTTTTGATTGTAAGAAGGCCAGAGGTAAGGTTGTGTTAATTTCGTTCCCGAGAATGGAAGGTGTTGACTATTTGGCCCCCGAGAGGAGCAAAGCTCAGTTCGATGTCGAAGAGATGAAAATCGTCTGGGCTGGTTCTCGTGAAGCTTTTGAAGTTTCCGATCGAATGGCTCGCCTTGTTGCCAGCGATCCGGTATTCAGAAAGGATAATAGGCCCATGCTTGACAGAAAAGAATTATTTAAGAACACTTTGAGGAAAGCAGCTCATGCATGGAAAAGGATAATTGAGCTTCGCCTCACTGAAGAGGAAGCTTCTAGACTTAGATTCTATGTGGATCAACCTGCATTTACGGATCTTCATTGGGGAATGTTTATCCCAGCTATAAAGGGACAAGGAACTGAGCAGCAGCAGCAGGAATGGTTGCCTTTGGCTTATAAGATGCAAATAATTGGTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTCGAAACAACTGCAACCTTTGATCTTCAAACCGATGAGTTTGTGATTAATAGCCCCACGCTAACTTCCAGCAAATGGTGGCCTGGTGGATTGGGTAAAGTTTCCACACATGCTGTTGTCTATGCCCATCTAATCACTGAAGGTCATGACCGAGGAGTGCATGGATTCATTGTCCAGCTGCGGAGCTTGGATGATCACTTGCCTCTTCCAGGCATAACAGTTGGTGATATTGGAATGAAATTTGGAAATGGGGCATACAACTCTATGGATAATGGGGTTCTAAGATTTGATAATGTTAGAATTCCAAGGAATCAAATGTTGATGAGGGTTTTACAGGTTACAAGAGAAGGAAAATGTGTCCAATCTAATGTACCACGGCAATTAGTTTATGGTACGATGGTATATGTGAGACAATCAATTGTGTCTGATGCATCAAGTGCTTTGTCACGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTCGAAGACAGTTTGGCTCACATAATGGAGGCCTTGAAACACAGGTGATTGATTACAAAACGCAGCAAGCTAGGCTCTTCCCCTTGCTAGCTTCTGCATATGCTTTCAGATTCGTTGGTGAATGGTTGAAATGGCTATATATGGATGTGACCCGAAGGTTGCAAGCCAATGATTTTTCAACATTGCCTGAGGCTCATGCATGCACTGCAGGATTGAAGTCCTTGACTACATCAGCTACTGCAGATGCGATTGAAGAATGCCGAAAACTTTGTGGTGGTCATGGTTACCTTTGTAGCAGTGGCCTTCCTGAGTTATTTGCAGTATACGTTCCTACCTGCACTTATGAAGGAGACAATGTTGTGCTGCTTTTACAGGTAGCAAGGCATCTCATGAAGACTGTCTCTCAGCTGGGCTCCGGGAAAAAACCCGTGGGTACAACTGCTTATATGGGTCGAGTGGAACATCTGATGCAGTGTTGCTCTGATGTTCATAAAGCTGAGGATTGGTTGAGGCCTAATGTAGTGCTGGAAGCATTTGAAGCTAGGGCTGCTAGGATGTCTGTTGGCTGCGCTCAAGCTCTGAGCAAGTTTACCAATCCAGAAGAAGGTTTTCAACAACTGTCAGCTGATTTAGTTGAGGCAGCAATTGCTCACTGCCAGTTGATTGTTGTTTCCAAATTTTTGGAGAAGTTGCAGCAAGATATACCTGGAGAGGGAGTGAAACAGCAATTACAAATTCTTTGTAGCGTATATGCTTTGTTTCTTGTTCATAAGAATCTGGGCGATTTTCTCTCCACTGGCTGCATCACTGCCAAACAGGGTTCACTTGCCAACGATCAGCTGAGATCCCTGTATTCCCAGGTTCGCCCTAATGCAATTGCACTTGTCGATGCGTTCAATTACACCGATCACTACCTTAGTTCGGCTCTGGGTCGTTACGATGGAAATGTATATCCGACACTGTATGAGGAGGCGTGGAAGGATCCTCTGAATGATTCGGTTGTGCCAGACGGTTACCAGGAATATGTTCGACCAATGCTGAAGCAACAACTTCGGAATGCTAGACTCTAA 2124 0.4468 MDSTTNVPLQRPNFGHNKAAGIKTLGFDCKKARGKVVLISFPRMEGVDYLAPERSKAQFDVEEMKIVWAGSREAFEVSDRMARLVASDPVFRKDNRPMLDRKELFKNTLRKAAHAWKRIIELRLTEEEASRLRFYVDQPAFTDLHWGMFIPAIKGQGTEQQQQEWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDLQTDEFVINSPTLTSSKWWPGGLGKVSTHAVVYAHLITEGHDRGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNSMDNGVLRFDNVRIPRNQMLMRVLQVTREGKCVQSNVPRQLVYGTMVYVRQSIVSDASSALSRAVCIATRYSAVRRQFGSHNGGLETQVIDYKTQQARLFPLLASAYAFRFVGEWLKWLYMDVTRRLQANDFSTLPEAHACTAGLKSLTTSATADAIEECRKLCGGHGYLCSSGLPELFAVYVPTCTYEGDNVVLLLQVARHLMKTVSQLGSGKKPVGTTAYMGRVEHLMQCCSDVHKAEDWLRPNVVLEAFEARAARMSVGCAQALSKFTNPEEGFQQLSADLVEAAIAHCQLIVVSKFLEKLQQDIPGEGVKQQLQILCSVYALFLVHKNLGDFLSTGCITAKQGSLANDQLRSLYSQVRPNAIALVDAFNYTDHYLSSALGRYDGNVYPTLYEEAWKDPLNDSVVPDGYQEYVRPMLKQQLRNARL 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0502 707 Pfam Acyl-coenzyme A oxidase N-terminal 60 175 IPR029320 -
Lele49g0502 707 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 51 302 IPR009100 GO:0016627
Lele49g0502 707 FunFam Acyl-coenzyme A oxidase 523 651 - -
Lele49g0502 707 Pfam Acyl-CoA oxidase 523 699 IPR002655 GO:0003997|GO:0005777|GO:0006635
Lele49g0502 707 PIRSF Acyl-CoA_oxidase 35 702 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lele49g0502 707 Gene3D - 60 175 IPR037069 GO:0016627|GO:0050660
Lele49g0502 707 Gene3D - 176 311 IPR046373 GO:0016627
Lele49g0502 707 FunFam Acyl-coenzyme A oxidase 60 175 - -
Lele49g0502 707 Gene3D - 319 492 - -
Lele49g0502 707 Pfam Acyl-CoA dehydrogenase, middle domain 177 290 IPR006091 GO:0016627
Lele49g0502 707 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 319 502 IPR036250 GO:0016627
Lele49g0502 707 FunFam Acyl-coenzyme A oxidase 319 492 - -
Lele49g0502 707 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 46 698 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lele49g0502 707 Gene3D - 523 651 - -
Lele49g0502 707 FunFam Acyl-coenzyme A oxidase 176 312 - -
Lele49g0502 707 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 507 700 IPR036250 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0502 Lele-ChrLele49 2997308 3004896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0502 44 707 Acyl Lipid Metabolism Gene Families AT4G16760 79.819 0.0 1108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0502 49 2997308 3004896 Lele51g0518 51 3054932 3060212 hybridization
Lele49g0502 49 2997308 3004896 Lele52g0533 52 3263481 3270443 hybridization