Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0497 ATGCGCAATATCAGAGCTGTCGGCAATAACTCTCAACAGGTCAAAAGAAAAGCCACATCATATGTCCATCTTTTCTACGTGTCATTCCCTCCAAGGCTTTTACGTGACTCCATCTCACCGTCAAGATATCGTTCAACAAAAGGTGGAGTAGAACCTAGGCGATTCTTGCACCCAAGCAAATATAGGCTTACGGATTTCAACTTCGCGTATTGCTCTGATTGTTTTTTGACCGCAAAGAGAGTTATGCATCTTGAGGAATTGAATGGAGAACAGGTGGGAGGTAGAGAGCAAGGTAAAGTGTATCTCGGAAATGGTGTTGTTGGCGGGGAAACTTTTGTCGTGTCAGATGCGAAAAGGGCTCTGGTTGGAGCGGGGGCTCGTGCTCTCTTCTATCCCACTCTGTTGTATAATGTCGTCAGGAATAAGGTGCAGGCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTACATATTATTAGGTGCTGTTCCCTTCCCTATTGATGTTCCCCGCTTAAAGGAGCTGGGTGTTCGAGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTGCCAACCTCACTTTATCACGCACATGGAATTGACCATCTTGTGATTCCTACTAGAGATTACTGTTTCGCACCTTCATTGCATGACATATGCTCCGCTGTAGACTTCATTCATGAAAATGCATTGGCTGGACGGGTTACATATGTCCATTGCAAAGCTGGGCGTGGTCGCAGCACAACTGTTGTGATCTGTTACCTGGTGCATCACAAGCTTATGACACCCAGTGCTGCATATGATTATGTAAAGTCAATTCGACCAAGGGTTCTTCTAGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTACCACCTTAGGGTGAGGAAAGCTATGGTGTATGCTCCCTCAGCGAAGCTAGTAATGAAGGCGCCTGCAGCAGCAGCAGCTTCACTTGAGCTTGTAACATTTGATGAGGGTTCAGTAGTTGTGGTAACGGAGTCAGATCTGGAAGGTTACGACCCCACTTTGGGAAGGGAGATATGGGCGAATGTGAGTTTGGTTTACCGTGTGCGGGTTGTGGGACAGGCAGCATTGACAAGAATATCTTGCTTTTGGCTGAGCTATGGTAGGCATCAGCAGTTTTCCTCAGGCATTAGTGTTGATATCCATGTCTACTGA 1182 0.4653 MRNIRAVGNNSQQVKRKATSYVHLFYVSFPPRLLRDSISPSRYRSTKGGVEPRRFLHPSKYRLTDFNFAYCSDCFLTAKRVMHLEELNGEQVGGREQGKVYLGNGVVGGETFVVSDAKRALVGAGARALFYPTLLYNVVRNKVQAEFRWWDKVDEYILLGAVPFPIDVPRLKELGVRGVITLNESYETLVPTSLYHAHGIDHLVIPTRDYCFAPSLHDICSAVDFIHENALAGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPSAAYDYVKSIRPRVLLASSQWQAVQEYYHLRVRKAMVYAPSAKLVMKAPAAAAASLELVTFDEGSVVVVTESDLEGYDPTLGREIWANVSLVYRVRVVGQAALTRISCFWLSYGRHQQFSSGISVDIHVY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0497 393 FunFam Dual specificity phosphatase domain protein 149 296 - -
Lele49g0497 393 Pfam Dual specificity phosphatase, catalytic domain 171 291 IPR000340 GO:0008138|GO:0016311
Lele49g0497 393 CDD PTPMT1 149 291 IPR044596 GO:0004721
Lele49g0497 393 ProSitePatterns Tyrosine specific protein phosphatases active site. 238 248 IPR016130 GO:0016311|GO:0016791
Lele49g0497 393 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 217 285 IPR000387 GO:0016311|GO:0016791
Lele49g0497 393 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 142 293 IPR029021 -
Lele49g0497 393 Gene3D Protein tyrosine phosphatase superfamily 149 297 IPR029021 -
Lele49g0497 393 SMART dsp_5 152 293 IPR020422 GO:0006470|GO:0008138
Lele49g0497 393 ProSiteProfiles Dual specificity protein phosphatase domain profile. 149 296 IPR020422 GO:0006470|GO:0008138
Lele49g0497 393 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 99 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0497 Lele-ChrLele49 2952536 2956094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0497 82 393 Protein tyrosine phosphatase (PTP) family AT2G35680 58.112 1.60e-128 371