Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0492 ATGCAAACCCACAACGCCATGCCCGGACCCACGAGCTCCGACTCCAACTTAGCCTTTTTGGAATCCATTCGCCGTCACTTGCTCGGTGAATCCAACGCTGCTCCGGCGGCTAAATCCAGTCTCAACATATTGGACCCGTGCCTGAGTCGTCATTGGGGCGAATTGCCCCTCAGACATGACGACCCCGAAGACATGCTGCTCTTCAGTCTACTGCGGGACGCACTTCAAGACGGATGGGCTCCAACCGTAAACGTTAGCTCACCGGAAAGCGTCTGCTCGACTTTGCCATTCACCGTTACGGTGAAACAGGAGCCGGATGTAGTACAGGTGGCGGCGGCCCCGCAAGAGAAGGTGAAGGAGAAGGTGAGGCATTACCGAGGCGTGCGTCAACGGCCTTGGGGGAAGTTCGCGGCGGAGATCCGAGACCCGGCTAAGAATGGAGCTCGGGTATGGCTGGGAACATTTGAGACGGCGGAGGACGCGGCTCTGGCATACGACCAAGCGGCTTACAAGATGCGGGGCTCGCGGGCTCTGGTTAATTTTCCGCTTAGGGTGAACTCGGGTGAACCGGAGCCTGTGAGAGTGAGGGCGAAGCGGTCTTCAACGGAGGCAATGTCGTCGGGTTCGGAGACTGAAAAGAGAAAGGAGAAGGTGGCGAGAAGGGAAGTTGGAAGTGAAGTGGCATCTTGTACAAATGGACAACACCTATTGGCCAGCGAATATGCTTAA 729 0.5679 MQTHNAMPGPTSSDSNLAFLESIRRHLLGESNAAPAAKSSLNILDPCLSRHWGELPLRHDDPEDMLLFSLLRDALQDGWAPTVNVSSPESVCSTLPFTVTVKQEPDVVQVAAAPQEKVKEKVRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDQAAYKMRGSRALVNFPLRVNSGEPEPVRVRAKRSSTEAMSSGSETEKRKEKVARREVGSEVASCTNGQHLLASEYA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0492 242 MobiDBLite consensus disorder prediction 190 229 - -
Lele49g0492 242 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
Lele49g0492 242 CDD AP2 124 182 IPR001471 GO:0003700|GO:0006355
Lele49g0492 242 Gene3D AP2/ERF domain 123 185 IPR036955 GO:0003700|GO:0006355
Lele49g0492 242 FunFam Ethylene-responsive transcription factor 2 123 183 - -
Lele49g0492 242 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Lele49g0492 242 MobiDBLite consensus disorder prediction 208 223 - -
Lele49g0492 242 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
Lele49g0492 242 PANTHER DNA-BINDING DOMAIN 100 213 IPR044808 GO:0003700|GO:0009873
Lele49g0492 242 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Lele49g0492 242 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Lele49g0492 242 SUPERFAMILY DNA-binding domain 124 184 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0492 Lele-ChrLele49 2925044 2925772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0492 13 237 AP2-EREBP Transcription Factor Family AT4G17500 48.327 1.19e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele49g0492 AP2 3.3e-15 CL0081