Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0491 ATGCAAAATGTAGATTGGCCCTTAGGAGATTATGAAAGATTGTACAATTATACCCAAGATGAATGCCAAACATCTTGCTGGGATGATTGTAATTGTGAAGTTGCCATTTTTGACAATCGTGGTAGTTGTTGGAAGAAAAGATTACCACTTTCTAATGGAAGAGGAAATGCAGGTAGTGGTCAAACGGCACTTATCAAAACTAAAATTTTGTCAAGGAGAAATCTTCAGCATTACGTTGACAAAAAAGAACCTGCAGCTCTTTTAGTAGCTTATTGGTTCCCTTGTCATGAACACTTTGCTTGTAGCCATTGTGCATTGAAAAAGGCAACTCATGGGTTCAATGAAGAGCTAGGAAGGGGTTCGTTTGGGATTGTGTACAAAGGCAACCTTAAATCAGGAACTAATAATAATGATAACGTTGTTGCGGTGAAGAGGTTGGATAGATTGGCTCAAGAACGAGAGAAGGAGTTCAGAACAGAGTTGAGTGCCATTGGGAAAACATGCCACAAAAATTTGGTGAGAAGAAATGTGATGATGGATGTGGATGAAGATGAAGAAGAAAAGGCAGTGCTAATAGATTGGGCTTATGATAGCTATACAGAAGGAAGAATAGAGATTCTGGTAGAGAATGATAAGGAAGCCATGGCTGACATAGAGAGGTTGAAGAAGATGGTGATGATAGCGATATGGTGTATTCAAGGGAAACATGAAGCAAGGCCAAGCATGAAGACTGTGATGCAAATGTTGGAAGGGCTTTGTTGA 762 0.3963 MQNVDWPLGDYERLYNYTQDECQTSCWDDCNCEVAIFDNRGSCWKKRLPLSNGRGNAGSGQTALIKTKILSRRNLQHYVDKKEPAALLVAYWFPCHEHFACSHCALKKATHGFNEELGRGSFGIVYKGNLKSGTNNNDNVVAVKRLDRLAQEREKEFRTELSAIGKTCHKNLVRRNVMMDVDEDEEEKAVLIDWAYDSYTEGRIEILVENDKEAMADIERLKKMVMIAIWCIQGKHEARPSMKTVMQMLEGLC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0491 253 Gene3D Phosphorylase Kinase; domain 1 79 187 - -
Lele49g0491 253 ProSitePatterns Protein kinases ATP-binding region signature. 117 144 IPR017441 GO:0005524
Lele49g0491 253 ProSiteProfiles Protein kinase domain profile. 111 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0491 253 SUPERFAMILY Protein kinase-like (PK-like) 93 174 IPR011009 -
Lele49g0491 253 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 179 252 - -
Lele49g0491 253 Pfam Protein tyrosine and serine/threonine kinase 113 178 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0491 Lele-ChrLele49 2920915 2922174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0491 97 195 Receptor kinase-like Gene Family AT4G23150 33.663 3.62e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele49g0491 PK_Tyr_Ser-Thr 1.8e-09 CL0016