Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0472 ATGTCGTACAGAACAATGGAACTTCATTCCAAATACCAACTAGGCCTTGTCTGTGTGATGGTGCTCTTACCTGCACTATGTACCTCCCAAGGCTTTACATCCTCCAGAGCTACGATCCCAGAATTACCTGGATATTGCGGTGTAAACCCAAATGGAGCTTGTGGATATGGCGAATATGCTAGGTCTATGAACAACGGGAACGTTGTGGCCGTGCCTGGTGGGTTATGGAGGAATGGCGCTGGATGTGGTGCTTGCTACCAAGTGAGGTGTAAGGATCGCAAATACTGCGATGAACACGGCATAGTGGTGGTGGCCACAGACTACGCTGCAGAAAGTAAAACAGGCTTCGAAATCAGTCCATGTCTCTTAAAAAGACTGCTACCTATCGACAAATACGGCATCGTAGACATCGAATACAGGAGGGTACCCTGCACATATGCAGGCTACAACGTGAAGATCAAGATCCACGAGTCCAGCAGATACCCAGATTATCTTGCTATTGGCCTTCTATACGTGCCTGGAATGAAAGACGTCACTGCCGTTGAGATATATCAGAATGATAATAAAGAATGGAGGCCAATGAGAAGAGCGTATGGGGCAGTGTTTGATATAGTGGGGGCACCAAGGGGACCGTTGAAGCTGAGGCTGCAATTCAGTGGAAGAACTGGTTGGGTTCAGTCGACTAAGAGCGCTATTCCTGGGGATTGGAAGATTGGAGCTTCTATGACTCTCAAGTTCATCTCTAATTAA 750 0.4733 MSYRTMELHSKYQLGLVCVMVLLPALCTSQGFTSSRATIPELPGYCGVNPNGACGYGEYARSMNNGNVVAVPGGLWRNGAGCGACYQVRCKDRKYCDEHGIVVVATDYAAESKTGFEISPCLLKRLLPIDKYGIVDIEYRRVPCTYAGYNVKIKIHESSRYPDYLAIGLLYVPGMKDVTAVEIYQNDNKEWRPMRRAYGAVFDIVGAPRGPLKLRLQFSGRTGWVQSTKSAIPGDWKIGASMTLKFISN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0472 249 PANTHER EXPANSIN-B3 23 242 - -
Lele49g0472 249 Gene3D - 145 243 IPR036749 -
Lele49g0472 249 Gene3D - 23 144 IPR036908 -
Lele49g0472 249 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Lele49g0472 249 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Lele49g0472 249 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Lele49g0472 249 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Lele49g0472 249 SUPERFAMILY PHL pollen allergen 150 240 IPR036749 -
Lele49g0472 249 SUPERFAMILY Barwin-like endoglucanases 18 148 IPR036908 -
Lele49g0472 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 149 IPR007112 -
Lele49g0472 249 Pfam Expansin C-terminal domain 151 233 IPR007117 -
Lele49g0472 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 244 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0472 Lele-ChrLele49 2821853 2823262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0472 9 241 Expansin Gene Family AT4G17030 50.826 4.54e-74 224