Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0470 ATGGAGCTTCATTCTAAATACCAAGTGGCCTTTGTTTGTGCGCTGCTCTTGCCTGCACTATGCTTATCCCAAGGCTTCACAGACTCCAGAGCCACCTTTTATAGTAGCCCAGATGGCAAAGGAACTTCAACCGGAGCTTGTGGATATGGCGACTACGGCAGAATTGTAAACCATGGTATGGTTGCCGGCGTGTCTGGGTTATGGAGAGGTGGCGCTGGATGTGGAGCTTGCTACCAAGTAAGGTGTAAGAATTCAAGATTGTGCGATAGCTACGGCACGATGGTGGTGGCAACGGACTTCGGTGCGGGAGACAGAACAGACTTCATAATGAGTCCAAATGCTTTCAAAGCTCTGGGACGAAACCCAAGTGCATCGGCGGAGCTCAAGAAATACGGCGTTGTAGACATTGAATACCGAAGGGTGCCCTGCACATATGCTGGTTACAACGTGCGAATCAAGATCCACGAGTCCAGCAATTACCCATACTACCTTGCTCTTGTCATTCAATACGTTCCTGGAATGAGCGACGTCACTGCCGTGGAGATATATGACAACGATAGCCATCAATGGAAGCCTATGAGAAGAGCGTACGGAGCAGTGTTTGATATAGCGGGCGCACCAAGTGGACCATTGACGCTGAGGCTGCAACTCAGTGGAAAAATAGGTTGGTTTCAGTCGTCCAAGAGTGCAATTCCTAAGGATTGGAAGATTGGAGCTTCGTACGACTCTCAAGTTCATCTCTAA 744 0.4906 MELHSKYQVAFVCALLLPALCLSQGFTDSRATFYSSPDGKGTSTGACGYGDYGRIVNHGMVAGVSGLWRGGAGCGACYQVRCKNSRLCDSYGTMVVATDFGAGDRTDFIMSPNAFKALGRNPSASAELKKYGVVDIEYRRVPCTYAGYNVRIKIHESSNYPYYLALVIQYVPGMSDVTAVEIYDNDSHQWKPMRRAYGAVFDIAGAPSGPLTLRLQLSGKIGWFQSSKSAIPKDWKIGASYDSQVHL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0470 247 Gene3D - 18 143 IPR036908 -
Lele49g0470 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 162 243 IPR007117 -
Lele49g0470 247 SUPERFAMILY Barwin-like endoglucanases 13 147 IPR036908 -
Lele49g0470 247 Gene3D - 144 244 IPR036749 -
Lele49g0470 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 148 IPR007112 -
Lele49g0470 247 PANTHER EXPANSIN-B3 14 246 - -
Lele49g0470 247 Pfam Lytic transglycolase 61 138 IPR009009 -
Lele49g0470 247 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576
Lele49g0470 247 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Lele49g0470 247 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Lele49g0470 247 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Lele49g0470 247 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Lele49g0470 247 SUPERFAMILY PHL pollen allergen 149 243 IPR036749 -
Lele49g0470 247 Pfam Expansin C-terminal domain 150 232 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0470 Lele-ChrLele49 2815218 2816226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0470 15 247 Expansin Gene Family AT4G17030 52.542 2.91e-84 250