Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0465 ATGGAGGGTTTTTGTTTTGCATGTGATTGTGATCATTTGGATGGAAGAGCTATGGAGCTTCATTATTCTAAATACCAAGTGGCCCTTGTTTGTGTGTTGCTCTTGCCTGCACTATGCCTTTCCCAATTCACAGACTCCAGAGCCACCTTTTACACTACCTCCGATGGCATGGGAACCCCAACTGGAGCTTGTGGATTTGGCGATTACGGCAGAACTGAAAACAACGGGATGGTTACCGCCGTGTCTGGACTATGGAGAGGTGGCGCCGGATGCGGTGCCTGCTACCAAGTAAGGTGCAAGGATACAGAATTATGCAGTACGAACGGGGCAACGGTGGTGACAACAGACATGGGTTCAGGAGACAGAACAGACTTCGTTATGAGTTTGAACGGCTTCGTGAAACTGGGATTGAACTCAAGTGCAGCGGAAGAGCTCAAGAAAAAGGGCACCGTTGACATCCAATACAGGAGGGTGCCATGCACATTTGATGGCTCCAACGTCAAGATCAAGATCAACGAGAACAGCAGATTCCCAGACTACCTTGCTATCGCCGTTATCTACGTGCCCGGATCCAAGGATGTCGTTGCCGTTGAGATCTCCAACAATGATGGGAGAGACTGGAAGGCAATGAGAAGAGTGTTTGGGGGAGCGTTTGATATAACAAATGCGCCACGTGGACCGTTCAAGGTGAGGGTGCAATTCAGTGGGAGCCAATCTTGGGTTGTGTCACCCAACAATGTTATTCCTGCCGATTGGAAGGTCGGAGCTATTTATGACTCAGGAATCCGTGCCTAA 795 0.4943 MEGFCFACDCDHLDGRAMELHYSKYQVALVCVLLLPALCLSQFTDSRATFYTTSDGMGTPTGACGFGDYGRTENNGMVTAVSGLWRGGAGCGACYQVRCKDTELCSTNGATVVTTDMGSGDRTDFVMSLNGFVKLGLNSSAAEELKKKGTVDIQYRRVPCTFDGSNVKIKINENSRFPDYLAIAVIYVPGSKDVVAVEISNNDGRDWKAMRRVFGGAFDITNAPRGPFKVRVQFSGSQSWVVSPNNVIPADWKVGAIYDSGIRA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0465 264 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 61 165 IPR007112 -
Lele49g0465 264 Gene3D - 37 161 IPR036908 -
Lele49g0465 264 Pfam Expansin C-terminal domain 167 249 IPR007117 -
Lele49g0465 264 Gene3D - 162 264 IPR036749 -
Lele49g0465 264 PANTHER EXPANSIN-B3 33 263 - -
Lele49g0465 264 Pfam Lytic transglycolase 84 155 IPR009009 -
Lele49g0465 264 PRINTS Expansin/Lol pI family signature 42 57 IPR007118 GO:0005576
Lele49g0465 264 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Lele49g0465 264 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Lele49g0465 264 PRINTS Expansin/Lol pI family signature 246 260 IPR007118 GO:0005576
Lele49g0465 264 SUPERFAMILY PHL pollen allergen 166 260 IPR036749 -
Lele49g0465 264 SUPERFAMILY Barwin-like endoglucanases 30 164 IPR036908 -
Lele49g0465 264 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 260 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0465 Lele-ChrLele49 2797409 2800853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0465 32 262 Expansin Gene Family AT4G17030 47.660 2.20e-72 220
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0465 49 2797409 2800853 Lele51g0485 51 2855356 2856731 hybridization
Lele49g0465 49 2797409 2800853 Lele52g0505 52 3070471 3071973 hybridization