Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0456 ATGGGAGCCGCCGTGAAGTGGGGTTCCGATTTTAAATTTAACAAGTCCGAAGATTGTTGCAACGCTTGTAAATCCATGTGTACTGGGAAAGATGGACCATGTCTCTGTGATTCGTGGGTTTTTTGTGGGAATCGTGAGACTTGCGGATCCAAGTTCGGCGAGTGCTGGTTGAAGAAACAAAAGGACAGCTTGACCCCTGCACGACAAGATGCTGGAGAAAAAGTTAGTTGGACTTCCGGTCTCATCTTTGGAAAAGGAGAAGGTATCATTGAGTTGGAAACAGAACACGGAGCTCTTCGGGTCAAACTTTTCCCTGACTGTGCTCCACACTCAGTTGCATACATTCTAGAGTTGCTGGCTTTGCGCCTTTGTGCTGGGTGCCAATTTTACCGTGCAGAAGGCCGGGGCCAATCATGGGATTCAGAAGGAAACCACTTAAAAAATGCTCCTTTTGGCCCCCCTTCTGCATTAATTCAAGGAACCTTAGAAGCACAGGGAAACCCATTTAAGAAAATTCCAGTAGAAGACTGTCCAACAATAAGAAGGGGTTCAGTTGCTTGGGTTGATTCAGGACCAGAATTCTTCATAAGCCTTGCTAACCATGGGGAGTGGAAAAAGGCGTACACAGTTTTCGGTTCTGTTCTTCCAGAAGACATGAGTATAGCCGAAAAAATTGCCGCACTACCCACAGTTTCCGATGCTTGGAACAATATTAAAGTTTCTGTCTTGGAAAAACCTGTTCCCTTGTTGCTACGAAGAATCCAGAAAAGCCTTGCAGATTAA 783 0.4547 MGAAVKWGSDFKFNKSEDCCNACKSMCTGKDGPCLCDSWVFCGNRETCGSKFGECWLKKQKDSLTPARQDAGEKVSWTSGLIFGKGEGIIELETEHGALRVKLFPDCAPHSVAYILELLALRLCAGCQFYRAEGRGQSWDSEGNHLKNAPFGPPSALIQGTLEAQGNPFKKIPVEDCPTIRRGSVAWVDSGPEFFISLANHGEWKKAYTVFGSVLPEDMSIAEKIAALPTVSDAWNNIKVSVLEKPVPLLLRRIQKSLAD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0456 260 FunFam Predicted protein 85 248 - -
Lele49g0456 260 Gene3D - 83 246 IPR029000 -
Lele49g0456 260 SUPERFAMILY Cyclophilin-like 85 242 IPR029000 -
Lele49g0456 260 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 90 232 IPR002130 GO:0000413|GO:0003755
Lele49g0456 260 PANTHER EXPRESSED PROTEIN 2 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0456 Lele-ChrLele49 2747074 2749118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0456 85 215 U-box Gene Family AT5G67530 26.471 1.69e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0456 49 2747074 2749118 Lele49g0456 49 2747074 2749118 ECH
Lele49g0456 49 2747074 2749118 Lele51g0474 51 2795009 2797202 hybridization
Lele49g0456 49 2747074 2749118 Lele52g0492 52 2988877 2991106 hybridization