Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0448 ATGAGGTGCTTCTTGTTCAAGTCTAAAAGAGGATCAAAATCCTCCTCAGAATCGCAGAAACAGAGACAGGATAATCATCCGGGTTCAAATCACGCGGTGAGTTCAACGAGTTCGCTGCCATCGCCGAGAACCTTAACAGAATTGTACAAAGAGAAAGAGCACAATTTGAGAGTTTTCACTTCGCAAGAGCTCAGAGAGGCCACGAATGATTTCAATAGGATGCGGAAGATTGGAGAGGGCGGTTTCGGGAGCGTTTATAAAGGTACAATTAGGTCTCAAGATGGTCAAGGCGATCCTATTGTTGTTGCGATAAAAAGCCTCAACACCCGTGGCTTTCAGGGGCATAAACAATGGCTGGCAGAGGTTCAATTTCTGGGCATTGTTAATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAAGATGGAGAAAGAGGGATCCAACGGCTGTTAGTTTATGAGTTCATGCCCAACAAGAGCCTGGAGGATCATCTTTTCAGACGGGATATTCCCACCTTGCCGTGGAAAACAAGATTGAAGATCATGCTCGGAGCTGCCCAAGGATTACTTTATCTACACGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACACGAACTTCCATCCAAAGCTTTCAGATTTTGGTCTCGCTAGGGAAGGTCCAACTGGGGATAAGACTCACGTGTCCACTGCGGTGGTCGGGACGCATGGATATGCTGCCCCAGAATATATAGAAACAGGCCACCTCAAAGTTCAGAGTGATATATGGAGTTTTGGTGTGGTATTATATGAGATGCTTACAGGGAGGCGATCATTAGATAGAAGAAGACAGAAAGAACAGAAGCTTCTAGATTGGGTTAAACAGTATCCTGCCGATAGTAGGAGGTTCAGCATGATAATGGACCCTCGTATCAGAAATGCGTATTCACATGGTGCTGCTCGGAAAGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAAACCTGAGGAAAGGCCATCCATGAGACAGGTAGTGGAAAGCTTGAAGCAAGCATTGCAGCATTCAGAAACTTCAAAAATGACTTCTGAATCGTCCCGACCTAAATTGGTTCCAACAAGCAAGTAG 1134 0.4453 MRCFLFKSKRGSKSSSESQKQRQDNHPGSNHAVSSTSSLPSPRTLTELYKEKEHNLRVFTSQELREATNDFNRMRKIGEGGFGSVYKGTIRSQDGQGDPIVVAIKSLNTRGFQGHKQWLAEVQFLGIVNHPNLVKLLGYCSEDGERGIQRLLVYEFMPNKSLEDHLFRRDIPTLPWKTRLKIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPTGDKTHVSTAVVGTHGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRRSLDRRRQKEQKLLDWVKQYPADSRRFSMIMDPRIRNAYSHGAARKVAKLADRCLNKKPEERPSMRQVVESLKQALQHSETSKMTSESSRPKLVPTSK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0448 377 Pfam Protein kinase domain 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0448 377 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0448 377 ProSitePatterns Protein kinases ATP-binding region signature. 77 105 IPR017441 GO:0005524
Lele49g0448 377 MobiDBLite consensus disorder prediction 21 42 - -
Lele49g0448 377 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 157 365 - -
Lele49g0448 377 SUPERFAMILY Protein kinase-like (PK-like) 53 351 IPR011009 -
Lele49g0448 377 CDD STKc_IRAK 77 353 - -
Lele49g0448 377 MobiDBLite consensus disorder prediction 349 377 - -
Lele49g0448 377 Gene3D Transferase(Phosphotransferase) domain 1 157 374 - -
Lele49g0448 377 PANTHER OS01G0588500 PROTEIN-RELATED 23 355 - -
Lele49g0448 377 Gene3D Phosphorylase Kinase; domain 1 44 156 - -
Lele49g0448 377 MobiDBLite consensus disorder prediction 6 42 - -
Lele49g0448 377 FunFam Serine/threonine-protein kinase BIK1 38 156 - -
Lele49g0448 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lele49g0448 377 MobiDBLite consensus disorder prediction 335 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0448 Lele-ChrLele49 2682931 2684744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0448 3 351 Glycoside Hydrolase AT3G07070 41.389 1.85e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele49g0448 Pkinase 8.3e-51 CL0016