Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0444 ATGGAATCTGGAGGCTTTCATGGCTACCGCAAGCTCCCTAACACTTCTTCTCCAGGGTTGAAGCTATCTTCATCAGTATCAGTACCGGAGACGATGAACAACCACAACCACTCATCTTTGTCATCCACTGCTGCAGAAGACAATGAATGCACCGTGAGGGAGCAAGACAGGTTCATGCCGATCGCCAACGTCATCAGAATCATGCGCAAGATCCTCCCTCCACACGCCAAGATCTCCGACGATGCCAAGGAGACCATCCAGGAATGCGTGTCCGAGTACATCAGCTTCATCACCGGTGAGGCCAACGAGCGGTGCCAGAGGGAGCAGCGGAAGACGATCACTGCCGAGGACGTGCTGTGGGCCATGAGCAAGCTTGGCTTCGACGACTACATTGAGCCGCTGACCATGTACCTTCATCGGTACCGCGAGATGGAGGGTGATCGAGCCTCCATGCGGGGCGAGCCGCTTGGCAAGCGGACGGTAGAGCCGCCGTATGGGGCACCAGGGTTAGGTGCTTTTGTGCCGCCGTTTCACATGGGCCATCCCAATGGCTACTTTGGAGCCATGGGAGGGTACATGAGGGAGCATGTGCAGAATAATAATGGAGGAGGGGGGTCTTCCTCACAAGCTGAACCAAATGGTCAATACAAGTGA 654 0.5535 MESGGFHGYRKLPNTSSPGLKLSSSVSVPETMNNHNHSSLSSTAAEDNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYREMEGDRASMRGEPLGKRTVEPPYGAPGLGAFVPPFHMGHPNGYFGAMGGYMREHVQNNNGGGGSSSQAEPNGQYK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0444 217 MobiDBLite consensus disorder prediction 197 217 - -
Lele49g0444 217 ProSitePatterns NF-YB/HAP3 subunit signature. 89 105 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lele49g0444 217 Gene3D Histone, subunit A 45 162 IPR009072 GO:0046982
Lele49g0444 217 MobiDBLite consensus disorder prediction 1 48 - -
Lele49g0444 217 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 36 191 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele49g0444 217 MobiDBLite consensus disorder prediction 199 217 - -
Lele49g0444 217 FunFam Nuclear transcription factor Y subunit B-6 47 162 - -
Lele49g0444 217 PRINTS CCAAT-binding transcription factor subunit A signature 86 104 - -
Lele49g0444 217 PRINTS CCAAT-binding transcription factor subunit A signature 124 142 - -
Lele49g0444 217 PRINTS CCAAT-binding transcription factor subunit A signature 105 123 - -
Lele49g0444 217 MobiDBLite consensus disorder prediction 16 48 - -
Lele49g0444 217 SUPERFAMILY Histone-fold 55 155 IPR009072 GO:0046982
Lele49g0444 217 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 58 122 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0444 Lele-ChrLele49 2663767 2666719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0444 1 185 CCAAT-HAP3 Transcription Factor Family AT5G47670 63.107 4.67e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele49g0444 CBFD_NFYB_HMF 6e-26 CL0012