Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0423 ATGGGTTGCTTAAACTCTAAAACAGCTCATCTTCACTCCCCTGACGATCCCTCAGCCTTCCCTGACGCCAACAAACCTGATCCAGCTAATGGGGATGATGTTGATCAAGAATGTCAAGTCCCAGCATTCAAAGAGTTCGGTCTCAATGAACTCCGAAGGGCTACGAACGAGTTCGGCACAAATTACATAGTGTCGGAAAGTGGCGAGAAAGCTCCCAATGTGGTCTACAAAGGGAAGCTTGAGAATAATCGCTTAGTCGCTATTAAACGCTTCTCTAAACAGTCTTGGCCAGACGCTCAGCAGTTTATGGCAGAGGCAGCTGGAGTTGGTAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGCTGTGCTGAAGGAGACGAACGGCTTTTGGTGGCAGAGTACATGCCAAACGATACATTATCAAAGCATCTCTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGTGTTAGAGTTGCATATTATGTTGCGCAGGCACTAGATCATTGTAGCATGGAAAATCGCAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGAAGGTGACCCCCGATTGTCAAGTTTCGGACTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACCAACTTAGCATATACTCCCCCTGAGTTTTTACGGACAGGCAGGATTATTCCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTTTTGAGTGGCAAGCATATTCCTCCAAGCCATGCTCTTGATCTGATTAGGGGTAAAAATGCCTTGTTGCTGATGGACTCATCCCTAGAAGGGCAATACGCTAATGATGATGCGACAAAGTTAGTTGAACTTGCCTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGCCCAGATATTAAGTTTCTTCTTGCAGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTGATGGGCCTGACTAAAAATACAGCAGTGCTACCAACCATGCTTTCGCCCCTAGGAAAGGCTTGTGCAAGGATGGATCTCACAGCTGCGCATGATATTTTGCTAAAAACGGGTTATAAAGATGAAGAAGGTGCTGAGAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGATATCTTGAACACAAAAAAATATGGGGATATTGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCTAAGTTGGTGGTGATGATGTCCGTTCCTTCGGCTACCGTATTCGCGAGAAGAGCGTTCTCATACTTGATGAACGAGCAGGCTGAGCTGGCGCTACGGGATGCGATGCAGGCACAGGTGTGCATTCCTGATTGGCCGACAGCATTCTACCTGCAGGCACTTGCTCTGTCGAAGCTGGGAATGGAGACTGATGCTCAGGACATGCTTAATGATGGAGCTGGCTTTGAAGCCAAGAGGTCAAACAGTTGGCGTGTAACTCCATTATCTGCTAGGTTAGACGCTTTCCTAAATTTCAAACTTCAAAGGCTAAATCCTAAAGGAAGAAGAGAAAGTTATATGGATAACAAGTCACCGAGCAAGAAGGCCACTAAGGAGGTTGCACGTGAGTTGCTCATCGCTATCTCTAACTCGTTGCCTGATAAGGTTGTGGAGTCAAATTGTGGATCTGAAATTAAGAAAGCAGATGGAGTTGCAGTGGCAAACGGTGATGTAGATGACAAGTTCCGATCTGAACTGATTTCAATCTCATACGCAGAATCCCCTGACATCGAAATCTGA 1785 0.4465 MGCLNSKTAHLHSPDDPSAFPDANKPDPANGDDVDQECQVPAFKEFGLNELRRATNEFGTNYIVSESGEKAPNVVYKGKLENNRLVAIKRFSKQSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYYVAQALDHCSMENRKIYHDLNAYRILFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLAAVAPLQKQKEVASHVLMGLTKNTAVLPTMLSPLGKACARMDLTAAHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKYGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAGFEAKRSNSWRVTPLSARLDAFLNFKLQRLNPKGRRESYMDNKSPSKKATKEVARELLIAISNSLPDKVVESNCGSEIKKADGVAVANGDVDDKFRSELISISYAESPDIEI 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0423 594 FunFam probable serine/threonine-protein kinase At4g35230 384 493 - -
Lele49g0423 594 MobiDBLite consensus disorder prediction 1 35 - -
Lele49g0423 594 SUPERFAMILY TPR-like 385 480 IPR011990 GO:0005515
Lele49g0423 594 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Lele49g0423 594 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 31 489 IPR045845 GO:0004672|GO:0009742
Lele49g0423 594 Gene3D Transferase(Phosphotransferase) domain 1 138 330 - -
Lele49g0423 594 FunFam probable serine/threonine-protein kinase At5g41260 138 329 - -
Lele49g0423 594 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
Lele49g0423 594 SUPERFAMILY Protein kinase-like (PK-like) 68 312 IPR011009 -
Lele49g0423 594 Gene3D Tetratricopeptide repeat domain 384 493 IPR011990 GO:0005515
Lele49g0423 594 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0423 594 Pfam Protein tyrosine and serine/threonine kinase 74 309 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0423 Lele-ChrLele49 2460004 2466406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0423 5 315 Glycoside Hydrolase AT3G07070 33.533 3.39e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele49g0423 PK_Tyr_Ser-Thr 2.3e-27 CL0016