Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0421 ATGGGAAGCGGACTTTCCAACCTCCTCCCTTGCTGCAAACCGGCTAACCGGACCACCAGCCCACCGGATCAACAGGAAGTGATCTTTACCGCCACTGAGCCCTTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCTTCTGCTCGCTTTCTTTCCCCCACTCACTCGGATCGATTCATCTCGCCTTCTAACTCCCTCCGCTTTTCTCCATCTAACGAACCCGTATCGAGAGCCCGACCCGATTTACCCGAAACCGTCTTCAAGGCCATTTCCGGAGCTTCCGTCAGCGCCAACAGTTCCACTCCCAAGACTGTTCTCCAGCTGGACAATATCCTCGATGACGTTGCGGACTGTGCCGCTGGGGGCGGCGTGAGGGGAAACATTGTGAATGGCTTCGAGAGCACATCGTCGTTTAGTGCTCTCCCGCTTCAGCCAGTCCCCAGGGGGGGTGACCACTCAGGTCCGGTAGAGAGGGGAGCCTTCTTTCTGTCTGGCCCAATTGAGCGCGGCGCCCTCTCTGGGCCTCTCGAACCCAGCGCCACCATCGAAGGCGGAGGCGGCGTCCCTTTCTCGGCGCCTCTTGGTGGCTTTTATGTCAAAAAGAAGCGGAAGAGGGGCATTCCAGGGTTTCGGAAGGCATTCCATGGGAACCTTTCGGAGAAGAAGCGGCCGTGGGTTGTGCCAGTGTTGAATTTTGTTGGAAGAAAGGATGTTCCGGCAAGCGAAGAGAAATCGGAGATAAAGAGTGAGAGTAATGTACAGTGGGCACTTGGGAAGGCGGGAGAGGATAGGGTACATGTAGTTGTCTCGGAAGAGCACGGCTGGTTGTTTGTTGGTATATACGACGGCTTCAATGGCCCCGACGCGCCGGAATTTCTGATGGGTCATCTTTATCGTGCAGTGTACAATGAATTACAGGGTCTGTTCTGGGAAGCTGAAGAAGCGGAGGAAACTAACCCATCGACCGCGCCTGCCGAGAATGCATTACTTAGAGAACAACCTGAACCATCGATTGAAATCTCCCACAGAGACTTAAAAAATGAAGGGGAAGTATCTGTGAGTAGAGAGGACTTAAATTCTTTGCCGGTTGATCGAGAATCAGCGAAGAGAGTAACGTTTCAAGCAGACGGAACGGAAAGTAGGCGTCGTAGATTATGGGAGTTACTCGCCGAAGCTGATGCTGAAGACGGGCTTGATCTTTCAGGGTCGGATAGATTTGCATTTTCCGTTGATGATGCTCTGAGCGTAAGCAATGCGGGCTCAGCAGTTAGCAGACGGTGGCTATTATTATCGAAGTTGAAACATGGATTATCAAAACATAAGGAGGGTCAAGGTAGCAAGTTGTTTCCCTGGAAACTCGGCACAGAAGATAAAGAGAAGGTTGAGGTAGAAAATCGGGCTGAAGAAAGGCCATCCCATGGTAATAGGAGGCGGAAAGTGGGTCCCGTGGATCATGATTCGGTTTTGAGAGCATTATCTAGGGCTCTTGAATTGACCGAACTTGCATACTTGGATATGACGGATAAGATTCTTGATACAAACCCGGAGATCGCTTTAATGGGGTCATGTCTGTTAGTTGTTTTAATGAGGGATGAAGATGTGTACGTGATGAATGTGGGAGATAGCCGAGCCATTGTTGCACAATATGAGCCCAAAGGGGTTAATTCTAGCGTGGAATTGGAGAGCAAAGGAGATAAGGGGTCAAGCACAGAGAGCATAGTTGAGGAGTCCTTAGCTCCTGGTGAAAGCGCAAACAAGTCGGGGATTGAGGGTCCTGCTCAAGAAATGAGGTCGATTGCATTGCAGCTGTCCACTGACCACAGCACAAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACATCCAGATGATAACCAATGCATTGTAAATGACAGGGTTAAAGGTCGTCTTAAGGTTACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCCAAGTGGAATGATCCTCTACTGGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTGTCCTTCGCTACGTCATCATAGATTATGCCCAAGAGACCAGTTCTTGATCCTCTCATCTGACGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTCTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCTCAACATTTGATTGAGGAGCTTCTCCTCCGTGCGGCGAAGAAAGCTGGAATGGATTTACATGACTTGTTGGATATCCCACAAGGAGATAGGAGGAAATACCATGACGATGTTACCGTCATGGTGATATCACTTGAAGGCCGAATCTGGAAATCATCAGGAAAGTATCTGTGA 2349 0.4921 MGSGLSNLLPCCKPANRTTSPPDQQEVIFTATEPLDETLGHSFCYVRSSARFLSPTHSDRFISPSNSLRFSPSNEPVSRARPDLPETVFKAISGASVSANSSTPKTVLQLDNILDDVADCAAGGGVRGNIVNGFESTSSFSALPLQPVPRGGDHSGPVERGAFFLSGPIERGALSGPLEPSATIEGGGGVPFSAPLGGFYVKKKRKRGIPGFRKAFHGNLSEKKRPWVVPVLNFVGRKDVPASEEKSEIKSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMGHLYRAVYNELQGLFWEAEEAEETNPSTAPAENALLREQPEPSIEISHRDLKNEGEVSVSREDLNSLPVDRESAKRVTFQADGTESRRRRLWELLAEADAEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGQGSKLFPWKLGTEDKEKVEVENRAEERPSHGNRRRKVGPVDHDSVLRALSRALELTELAYLDMTDKILDTNPEIALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEPKGVNSSVELESKGDKGSSTESIVEESLAPGESANKSGIEGPAQEMRSIALQLSTDHSTSIEEEVIRIKNEHPDDNQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDLHDLLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0421 782 SUPERFAMILY PP2C-like 260 771 IPR036457 -
Lele49g0421 782 SMART PP2C_4 248 768 IPR001932 -
Lele49g0421 782 CDD PP2Cc 486 770 IPR001932 -
Lele49g0421 782 Gene3D - 235 777 IPR036457 -
Lele49g0421 782 Pfam Protein phosphatase 2C 495 552 IPR001932 -
Lele49g0421 782 Pfam Protein phosphatase 2C 603 738 IPR001932 -
Lele49g0421 782 MobiDBLite consensus disorder prediction 1 22 - -
Lele49g0421 782 MobiDBLite consensus disorder prediction 557 589 - -
Lele49g0421 782 PANTHER PROTEIN PHOSPHATASE 2C 245 769 IPR015655 GO:0004722|GO:0006470
Lele49g0421 782 ProSiteProfiles PPM-type phosphatase domain profile. 248 770 IPR001932 -
Lele49g0421 782 MobiDBLite consensus disorder prediction 462 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0421 Lele-ChrLele49 2443800 2448731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0421 1 782 PP2C-type Phosphatase Gene Family AT2G35350 58.140 0.0 844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0421 49 2443800 2448731 Lele51g0432 51 2491600 2496568 hybridization
Lele49g0421 49 2443800 2448731 Lele52g0448 52 2647754 2652594 hybridization