Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0418 ATGGGAGGTGCGTCACTGCCACCAGGTTTTCGATTCCACCCGACTGATGAAGAACTGGTAGGATATTACCTGAAAAGAAAAGTGGAGGGGCTGGCAATTGAGCTTGAAGTTATCCCCGTCATTGATCTTTACAAATTTGATCCCTGGGAGTTACCTGAGAAATCATTCCTTCCAAAGAGAGATATGGAATGGTTTTTCTTCTGTCCAAGGGATCGAAAGTATCCGAATGGATCAAGAACAAATAGAGCAACCAAAGCTGGATACTGGAAAGCCACCGGAAAAGACAGAAAGGTCGTGTGCCAGTCTTCTCCTTCCTCTGTCACTGGTTACCGCAAGACTCTGGTTTTCCACAGTGGAAGAGCTCCTCTAGGAGATCGAACCAACTGGTTCATGCACGAGTATCGCCTTTGTGATGATCTTGGCACAGGATCACCAAGCTTTCAGGGTGCTTTTGCTCTGTGCCGAGTGATTAAGAAGAATGAGAAACCAATTGATTTGAGGGGAGATCAAAAGGGTAAAAGGGCTGAAAGTAGTTCTGTTAATGGGAATGAAACTTCAATGAAAATCTCAAATGAGCCTTTCAATATCGCTGGGGATGTTTCGTCACAAACAAGTCATCTGTACAATGAGAGTGGTCATTCAAGCCCTATTACTTCTCCCTCCAATGTGGTTCAGATGGCAGAGTTCGAGCAAGCTTCCATGGAGACCAATCCTTCAGATATCTGGATCTCTCCAGATTTTATTCTTGATTCTTCAAAGGACTATCCTGAAGTACAAAATGCAGTGTCCGAATACTTTCCACAGTATGACTTATCAAGCCCAATGACCCCATGGCAGCCATTGGAGCACACAGAGATTTCACCCTCTTCATCGTACTCAAATTTGAATGGGGAGGTTGAATTTGCTGGTGATATTAATATGTCAACCTACATGGCACAAGCAAACTTCATGAACTTTTATGGAAATGACTCTATGCCCTATGGAGGATTTGATCAGAACAATTCAATGACGTATCCGAGACATTTCTGA 1029 0.4354 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLAIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSSPSSVTGYRKTLVFHSGRAPLGDRTNWFMHEYRLCDDLGTGSPSFQGAFALCRVIKKNEKPIDLRGDQKGKRAESSSVNGNETSMKISNEPFNIAGDVSSQTSHLYNESGHSSPITSPSNVVQMAEFEQASMETNPSDIWISPDFILDSSKDYPEVQNAVSEYFPQYDLSSPMTPWQPLEHTEISPSSSYSNLNGEVEFAGDINMSTYMAQANFMNFYGNDSMPYGGFDQNNSMTYPRHF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0418 342 MobiDBLite consensus disorder prediction 165 190 - -
Lele49g0418 342 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Lele49g0418 342 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Lele49g0418 342 MobiDBLite consensus disorder prediction 175 190 - -
Lele49g0418 342 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 222 - -
Lele49g0418 342 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Lele49g0418 342 FunFam Nac domain-containing protein 86 15 162 - -
Lele49g0418 342 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0418 Lele-ChrLele49 2424848 2426370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0418 1 334 NAC Transcription Factor Family AT4G17980 53.846 5.51e-114 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele49g0418 NAM 6.5e-38 No_clan