Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0417 ATGGTCCTGAGATTTCATGCAGGCTTAGAAATGGCAATGGCTGGGAATGAGAATGGCAGAACCACTGGGGATTGGAAGAAGCGTGTTCATATAGTTGGTGAGAAACTGAAGAGGCTTCCGAGTTTGGCTTGGCAAACCATGTGGAAGGTGGGACGCGAAGACCCCAGAAGGGTGGTTCATGCTTTAAAAGTGGGATTGTCTCTAACTCTTGTTTCTCTGCTGTATCTGGTGGAGCCACTGTTCAACGGGATTGGAAAGAATGCTATTATAGCTGTAATGACCGTGGTGGTTGTGCTTGAGTTCACAGCAGGCCAGTTTCTCTCGATTGGGGCAACATTATGCAAAGGTCTGAACAGAGGATTGGGAACCCTTCTGGCAGGATTATTAGCATTGCTTATTCAGTATATTGCAAAATCATCAGGCCATGTCTTCAAAGCTATTTCCATTGGAGCTGCTGTTTTTCTTACAGGAGCTGCTGCTACTTATATGAGGTTCTTTCCCCACATAAAGAAGAACTATGACTATGGTGCAGTGATATTTCTCTTGACCTTTAATCTGATAACCGTGTCGAGCTACCGAGTTGACAATGTCTTGACCATTGCACACGATCGCTTGGTCACCATAGTCATAGGCTGTGGCATCTGCCTTCTCATGAGTCTATTGATATTTCCAAATTGGTCAGGCGAAGACCTTCATAATTCCACAGTTTTCAAGTTTGAAGGCCTAGCCAATTCTATAGAAGTGTGTGTCAATGAATACTTCTATGGGGAAATGGAAGCAAGTGAAGACATAAAATCGTCCGAGGATCCTATTTACAAAGGTTATAAGGCAGTTCTGGACTCAAAATCCACTGACGAAACACTGGCTTTACATGCAAGTTGGGAGCCGAGGCATTCAATGTATTGTCACAGATTTCCATGTAAGCAGTATGTGAAAGTTGGAGCTGTTCTTCGTCAATTTGGCTACACTGTGGTTGCTTTGCATGGTTGTTTAAGAACTGAAATTCAGACACCACGATCTGTCCGAGCCCTGTTCAAGGATCCATGCATACGGCTTGCTGCAGAGGTGTCAAAAGTACTGATAGAACTAGCCAACAGCATAAGGAATCGTCGCCATTGCTCCCCGGAAATACTCTCCGACCATCTTCATGAAGCCTTACAAGACCTCAACACTGCAATAAAATCTCAGCCTCGTCTCTTTTTGGGATCCAGTAATAGCCGAGCAACCAAGATGTTTGCTATAGCTGCAGCACAGGCAGGGCAGAAAATACAGAAACACAACAATGAAGTTTCACTGTCAAGTGTTAAAACAGACTCTTCAGCATTGCTGGAATGGAAAACTAAAAGGGTTTCCGCTGATCAGTCAAAGGATTCAGAACGAAAGTCTTTAAGACCCCAACTAAGTAAAATCGCGATCACTAGCCTTGAGTTCTCTGAAGCTCTTCCTTTTGCTGCTTTTGCTTCATTGCTGGTGGAGACAGTTGCAAAATTGGACTTTGTCATAGAGGAAGTTGAAGAACTGGGCAGATTAGCTTGCTTCAAAGAGTTCAAACCGGATGATGATGATGAGGTTGTTGTCACCTGTGAGAAACCCCGTGTTGATGTGACTCAAAACCATTTACCTTCTCACGGAGTAGATTGA 1641 0.44 MVLRFHAGLEMAMAGNENGRTTGDWKKRVHIVGEKLKRLPSLAWQTMWKVGREDPRRVVHALKVGLSLTLVSLLYLVEPLFNGIGKNAIIAVMTVVVVLEFTAGQFLSIGATLCKGLNRGLGTLLAGLLALLIQYIAKSSGHVFKAISIGAAVFLTGAAATYMRFFPHIKKNYDYGAVIFLLTFNLITVSSYRVDNVLTIAHDRLVTIVIGCGICLLMSLLIFPNWSGEDLHNSTVFKFEGLANSIEVCVNEYFYGEMEASEDIKSSEDPIYKGYKAVLDSKSTDETLALHASWEPRHSMYCHRFPCKQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRALFKDPCIRLAAEVSKVLIELANSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGSSNSRATKMFAIAAAQAGQKIQKHNNEVSLSSVKTDSSALLEWKTKRVSADQSKDSERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDFVIEEVEELGRLACFKEFKPDDDDEVVVTCEKPRVDVTQNHLPSHGVD 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0417 546 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 36 518 - -
Lele49g0417 546 Pfam Aluminium activated malate transporter 48 508 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0417 Lele-ChrLele49 2420630 2422786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0417 1 531 Miscellaneous Gene Families AT4G17970 62.566 0.0 675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0417 49 2420630 2422786 Lele49g0417 49 2420630 2422786 ECH
Lele49g0417 49 2420630 2422786 Lele51g0428 51 2468466 2470590 hybridization
Lele49g0417 49 2420630 2422786 Lele52g0444 52 2627610 2629712 hybridization