Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0415 ATGGATAAAACGAACATGAATCAACCAAAATGTCCAGGATTTAGCTCTAAATCACGAAGTTGTCGTTTTATGTTATTTCTTATTGTTCCTCTCACGGACCACATGCTGAAAAGTGAAAGCCTTCCCTCTGCTTGTGCTTGGGTTCTTGTATTTCTGCATTTTCGATTTGCCTCCATATACTCCTCCGGCAAATGGTATATTGCTTTTTCTATGGACGGTTTTCTCGTTAGTGCTGGCCATGTCTCGGTTGGAGTCACAGCTGTGCCTCCTCCTGGCGCTGAAATGGCCCAGTTGGTTTGTGGAGGCTGCCACACTTTGCTCATGTACATTCGTGGAGCCACAAGTGTTCAATGCTCTTGTTGTCACACTGTCAATCTTGCTTTGGAAGCAAATCAGGTGGCCCATGTCAATTGTGGGAACTGCAGGATGTTACTGATGTACCAATATGGAGCAAGATCCGTTAAATGCGCTGTTTGCAATTTTGTGACATCAGTTGGGGGTGTCAGGAAGCACGACTGA 519 0.4528 MDKTNMNQPKCPGFSSKSRSCRFMLFLIVPLTDHMLKSESLPSACAWVLVFLHFRFASIYSSGKWYIAFSMDGFLVSAGHVSVGVTAVPPPGAEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGGVRKHD 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0415 172 Pfam LSD1 zinc finger 100 124 IPR005735 -
Lele49g0415 172 Pfam LSD1 zinc finger 138 162 IPR005735 -
Lele49g0415 172 PANTHER PROTEIN LSD1 85 166 IPR040319 -
Lele49g0415 172 SUPERFAMILY Multiheme cytochromes 86 159 IPR036280 -
Lele49g0415 172 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 97 126 IPR005735 -
Lele49g0415 172 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 135 165 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0415 Lele-ChrLele49 2410488 2413507 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Lele49g0415 zf-LSD1 2e-12 No_clan