Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0409 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCAAAATCTTCACAGACCCGACTTGCACCTTCAGCAGCAGCCGCACCCACCCGATTCCGAAGACGATGGCAATCGAGTTGGCCCCTTTTTTTCCGAAGATGGTCCCCACCAAGGCCTCGAGCTCGCCTCAGCCTCCGCAGGTCCCGGCGACATCGTCGCCCGCCGTCCACGCGGCCGCCCTCCTGGTTCAAAGAACAAGCCCAAACCACCCGTCATCATCACCAGAGAAAGCGCCAACACCCTCCGCGCTCATATTCTAGAAGTTGCCAGTGGCTCCGATGTCTTTGACTCCGTCGCCACCTATGCACGTCGCCGCCAGCGCGGGATCTGTATTCTGAGCGGCAGTGGCACCGTCACCAATGTGACCTTGAGGCATCCGGCTGCCGCAGGAGCCGTGGTCACCCTTCCCGGAAGGTTCGAGATATTGTCGCTGTCGGGGTCGTTCCTGCCACCGCCGGCCCCGCCTGGTGCGACGAGCCTGACTGTGTACTTGGCCGGAGGGCAAGGACAAGTTGTGGGAGGATGTGTGGTGGGAGAGTTGACGGCAGCTGGACCGGTCATGGTGATCGCATCTTCGTTTACGAACGTGGCGTACGAGAGGTTGCCGCTGGACGAGCAGGAGGAGCAACTCCAGATGCAACCACCCGCGACTTATTCTCAAGGATCGGGGTCGGCTGCAGCTTTCCCTGACCCATCCTCCGGTCTACCCTTCTTCAATTTGCCCCTTAATATGCAGATTCCTGTGGAAGGCTGGGACGGCAACTCAGCCCCTCGTCCTCCATTTTGA 825 0.5976 MAGLDLGTASRFVQNLHRPDLHLQQQPHPPDSEDDGNRVGPFFSEDGPHQGLELASASAGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTLRHPAAAGAVVTLPGRFEILSLSGSFLPPPAPPGATSLTVYLAGGQGQVVGGCVVGELTAAGPVMVIASSFTNVAYERLPLDEQEEQLQMQPPATYSQGSGSAAAFPDPSSGLPFFNLPLNMQIPVEGWDGNSAPRPPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0409 274 MobiDBLite consensus disorder prediction 221 240 - -
Lele49g0409 274 ProSiteProfiles PPC domain profile profile. 91 228 IPR005175 -
Lele49g0409 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 223 - -
Lele49g0409 274 FunFam AT-hook motif nuclear-localized protein 94 222 - -
Lele49g0409 274 Gene3D - 94 228 - -
Lele49g0409 274 MobiDBLite consensus disorder prediction 15 84 - -
Lele49g0409 274 CDD DUF296 95 178 IPR005175 -
Lele49g0409 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 231 IPR014476 GO:0003680
Lele49g0409 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
Lele49g0409 274 MobiDBLite consensus disorder prediction 223 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0409 Lele-ChrLele49 2385183 2386007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0409 1 274 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.113 1.78e-99 291