Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0402 ATGTTCGAGCAGTACCCAGTGGATTGTATGGCATACGAGGTTGATGACTTTCAGGATTTGTCCGGATACGGTGACAGTTACTCATGTTTCGACTCTAAAAGAAGCCGTGACGACTGGTTCCCAGTGGAGAGTCCAGAATCTGTCGCCCAACAGAGACCGACAAAGCAACCCAAGAGCACCAACAACACTAGCTGGACCTCTTGCCCCACTACAACAATGGCTGAACCCATCATCCCTTCCAACCATTCTGCTTCGAATTCCACCTCCCAGATCATTTCTTTCCAGAACTCTGATTCTTCCCCAGATGTCGCTTCTCACCAATTTTGCAGCTTGGATTCTAGTACCGTTGTCAAGCCTAAAACCGAGACTATTCTCACCTCCGACAACTTGGATTTCAGTGCTCCATTCTCCATTTCTCAATCCACCTATGACCACAAACCTCATTCATTTTTACTCCCACACGTGAATAAAACTGCCACCGTTACCAGAAATCCAATACAAGCTCAAGACCACGTCATGGCCGAACGAAAACGAAGGGAGAAGCTCACCCAGAGGTTTATTGCTCTTTCCGCCATTCTTCCCGGACTCAAAAAGATGGATAAGGCTTCAGTACTAGGAGATGCTATCCACTATGTGAAACAACTGCAGGAGCGCGTGAAAAATCTGGAGGAGCAGGTAAACAAGAAAGCATTGGAATCCGCAGTGTTTGTGAACAGGTCTGTTCTCTATGCCGACGATGATGGCTCCTCCTCCGATAAAAATTTCAACAGCCGTTCTGACCAGCCACTGCCGGAAATCGAAGCAAGAGTTTCGGGCAAGGAGGTACTGATAAGAATCCACTGCGACAGACAAAACGGATATTGTGCCACCATACTCTCCCGGTTACAACATCTCAATCTCACTGTCCAGAGTAGCAGCTTCTTGCCCTTCGGGAATACCACTCTTGATATTACTATTGTTGCTCAGATGAACAAGGAAGACTGCGTGACAGCAAAAGATATAATAAGAAGCCTGAGGCAGGGTCTGAGGCACTTAAATCGATGA 1044 0.4703 MFEQYPVDCMAYEVDDFQDLSGYGDSYSCFDSKRSRDDWFPVESPESVAQQRPTKQPKSTNNTSWTSCPTTTMAEPIIPSNHSASNSTSQIISFQNSDSSPDVASHQFCSLDSSTVVKPKTETILTSDNLDFSAPFSISQSTYDHKPHSFLLPHVNKTATVTRNPIQAQDHVMAERKRREKLTQRFIALSAILPGLKKMDKASVLGDAIHYVKQLQERVKNLEEQVNKKALESAVFVNRSVLYADDDGSSSDKNFNSRSDQPLPEIEARVSGKEVLIRIHCDRQNGYCATILSRLQHLNLTVQSSSFLPFGNTTLDITIVAQMNKEDCVTAKDIIRSLRQGLRHLNR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0402 347 PANTHER BHLH TRANSCRIPTION FACTOR 46 342 - -
Lele49g0402 347 MobiDBLite consensus disorder prediction 43 88 - -
Lele49g0402 347 Pfam Helix-loop-helix DNA-binding domain 169 216 IPR011598 GO:0046983
Lele49g0402 347 CDD bHLH_AtNAI1_like 168 240 - -
Lele49g0402 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
Lele49g0402 347 SMART finulus 172 221 IPR011598 GO:0046983
Lele49g0402 347 Gene3D - 167 236 IPR036638 GO:0046983
Lele49g0402 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 233 IPR036638 GO:0046983
Lele49g0402 347 Coils Coil 205 232 - -
Lele49g0402 347 MobiDBLite consensus disorder prediction 47 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0402 Lele-ChrLele49 2332065 2333314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0402 81 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.729 5.85e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g0402 HLH 1e-09 No_clan