Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0401 ATGCCGGTTCTCGACCTTGTTAATGGCATTAACAGCTATAATAATCAGCCACCACAACAAAGGAAAGCTCCATTGCAGATTGATTTCTCAGGAGCTACTTCCAGGTCTGCTGTGACTGATATGACTGTCTCGTCCTTTGCTCTCTCATCCACCCCACACTCTCAACCTACACTCACCCTCCATCCTCCGGCTCATTTCATTAACAGTGAGCACCCCAAAATGCGACCGCTCCTCTTGCTCCTTCTCCTTCTCCATTTCAACCACTCCTTTTCTGCACGCTTCTCTGAGTACCGTGCCCTCCTCTCCTTCAAGGCCTCCATTTCCGACGACCCTCAATCTGCTCTTTCTTCCTGGAATTCCTCGACTGACTACTGCACATGGTCCGGCGTCACCTGTGACTCCCGCCGACACGTTTCTTCTCTCGACCTTACCGGGCTCAACCTCTCTGGCACGCTCTCCGATGATCTTGCTCATCTTCCATTTCTTTCTAACCTCTCCCTCGCTGGTAACCAGTTCTCTGGACCCCTCCCCCCGGGGATCTCTGCCATTGCCAGCCTTCGCTTCCTAAACCTCTCAAACAATGGCTTTAATGGCACTTTCCCTCCCGAATTTTCCCAGCTCAAGATTATTCAGGTCCTCGACCTCTATAACAATAACATGAGTGGATCCCTTCCGCGCGTGGTGACTCAGATGCCACATCTCCGGCATCTGCATCTCGGGGGAAACTTATTTTCGGGTCAGATCCCACCGGAGTACGGACGTTGGGAACATTTGGAATACTTGGCTGTTTCAGGTAACGAGCTGGATGGTCCTGTGCCGCCAGAGATAGGAAACTTGACCAGCCTCCGGGAACTCTATATCGGATACTTCAACACTTACACGCGTGGCATACCACCTGAGATTGGAAACTTGTCCAGACTCGTCAGATTTGACGCGGCGAACTGCGGATTGACTGGCGAGATACCTTCGGAAATTGGGAAGCTTCAGAACCTCGATACTCTGTTTCTTCAAGTGAATGGACTTTCAGGTTCTCTGACCCCAGAGCTTGGAAGCTTGAAGAGCTTAAAATCCATGGACTTGTCCAATAATATGCTTACGGGTGAGATTCCGGAGAGCTTTGGTGAGCTCAAGAACCTAACGCTTCTGAACCTGTTCAGAAATAAGCTTCATGGAGCTATTCCTGAGTTCATTGGGGATTTGCCGGCGCTGGAGGTACTCCAGCTTTGGGAGAATAACTTCACCGGAAGCATTCCTCAGGGTCTGGGAAAGAACGGGAGGCTTGTATTTGTCGATCTATCGTCAAACAAATTGACTGGAACTCTTCCTCCTGATATGTGCTCTGGCAATCATCTCCAGACTTTGATTATCCTAGAAAACTTTCTTTTTGGTCCTATCCCTGAATCGCTCGGGAGATGCGAGTCATTGTCTAGGATTCGTATGGGAGAAAACTTTCTAAATGGGTCAATACCGAAGGGCCTTTTCGGGCTTCCAAAACTCACTCAGGTTGAGCTGCAGGACAATCTTCTCTCAGGGCAGTTTCCCCAAGCAAGTTCTGTTTCTGTCCATCTTGGTCAGGTCATTCTATCCAACAACCAGCTTTCCGGGCAGTTGCCTCCCACGATTGGGAACTTTTCTGGAATGCAGAAGCTCCTTCTTGATGGCAACAAATTCTCAGGCCAAATCCCTCCAGAGATTGGGAGGTTGCAGCAGCTCTCAAAGATAGATTTTAGTCATAACAAATTCTCAGGCCCTGTTGCACCGGAAATAAGCCATTGCAAGCTGTTGACGTTTGTTGATCTTAGCCGCAATGAGCTTTCCGGTGAGATTCCAACTGAGATCACTGGCATGAGAATATTGAATTACTTGAATCTTTCAAGAAACCAGTTAGGTGGGAGGATTCCTGCATCAGTAGCCTCCATGCAGAGCTTGACGTCGGTTGATTTTTCATACAACAATCTCTCCGGCTGGGTTCCTGGTACCGGCCAGTTTAGCTATTTCAACTACACATCATTCCTGGGTAACTCTGACCTTTGTGGTCCGTATCTGGGTCCTTGCAAGGATGGGGTTGCAAATGGCGCTCACCAGCCTCACCTCAAAGGTCCGCTGTCTGCTTCTATGAAGCTTTTACTGGTGCTTGGTTTGCTTCTATGTTCCATTGCATTTGCAGTTGCGGCAATAATAAAAGCCCGGTCGCTGAAGAGGGCCAGCGAAGCTCGTGCATTTAAATTGACTACTTTCCAACGGTTGGACTTCTCTGTTGATGATGTTTTGGATTGCCTGAAGGAGGACAACATCATAGGGAAAGGGGGTGCAGGCATTGTCTACAAAGGGACAATGCCCAATGGGGATCAGGTTGCTGTGAAAAGATTACCAGTTATGAGTAGAAGTTCTTCTCATGATCATGGGTTCAATGCAGAGATCCAGACATTAGGGAGAATCCGACATAGGCACATTGTAAGATTATTGGGTTTCTGTTCAAACAACGAAACAAATCTTTTGGTCTACGAATTCATGCCGAACGGAAGTCTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATTTGGTTTGGGACACTAGGTATAAGATTGCTGTGGAGGCTGCGAAGGGACTTTGCTATCTTCATCATGACTGTTCGCCACTTATAGTCCATAGAGATGTAAAATCGAACAATATCCTCCTTGACTCCAATTTTGAAGCACACGTTGCTGATTTCGGGCTTGCCAAGTTTCTTCAAGATTCAGGAACTTCCGAATGCATGTCGGCTATTGCCGGATCATATGGATACATAGCTCCAGAATATGCCTACACACTAAAAGTTGACGAGAAGAGCGACGTGTACAGCTTTGGAGTGGTGCTTTTAGAGCTTATAACGGGCAAGAAACCAGTTGGAGAATTTGGTGATGGGGTGGACATTGTTCAGTGGGTAAGAAAAATGACGGACTCAAATAAGGAAGAAGTCGTCAAAGTTCTTGATCCCAGACTCTCATCTGTACCCCTTCAAGAGGTCGTGCATGTGTTTTACGTAGCCATGCTTTGTGTCGAAGAGCAGGCAGTGGAGAGACCAACAATGCGCGAAGTTGTTCAAATTCTAACCGAACTCCCAAAGTCTCCTGGCTCTAAACAGGGAGACATTGCAATAGAATCTTCCATGTCATCGGCAGAGGGTTCAACCACGCAATCTAAAGAATTAAAGGAAGAAACTCCCCAATCACGACCTGCTGATGTTCTCGGCATTTGA 3240 0.4756 MPVLDLVNGINSYNNQPPQQRKAPLQIDFSGATSRSAVTDMTVSSFALSSTPHSQPTLTLHPPAHFINSEHPKMRPLLLLLLLLHFNHSFSARFSEYRALLSFKASISDDPQSALSSWNSSTDYCTWSGVTCDSRRHVSSLDLTGLNLSGTLSDDLAHLPFLSNLSLAGNQFSGPLPPGISAIASLRFLNLSNNGFNGTFPPEFSQLKIIQVLDLYNNNMSGSLPRVVTQMPHLRHLHLGGNLFSGQIPPEYGRWEHLEYLAVSGNELDGPVPPEIGNLTSLRELYIGYFNTYTRGIPPEIGNLSRLVRFDAANCGLTGEIPSEIGKLQNLDTLFLQVNGLSGSLTPELGSLKSLKSMDLSNNMLTGEIPESFGELKNLTLLNLFRNKLHGAIPEFIGDLPALEVLQLWENNFTGSIPQGLGKNGRLVFVDLSSNKLTGTLPPDMCSGNHLQTLIILENFLFGPIPESLGRCESLSRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLLSGQFPQASSVSVHLGQVILSNNQLSGQLPPTIGNFSGMQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGPVAPEISHCKLLTFVDLSRNELSGEIPTEITGMRILNYLNLSRNQLGGRIPASVASMQSLTSVDFSYNNLSGWVPGTGQFSYFNYTSFLGNSDLCGPYLGPCKDGVANGAHQPHLKGPLSASMKLLLVLGLLLCSIAFAVAAIIKARSLKRASEARAFKLTTFQRLDFSVDDVLDCLKEDNIIGKGGAGIVYKGTMPNGDQVAVKRLPVMSRSSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNNETNLLVYEFMPNGSLGEVLHGKKGGHLVWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKKPVGEFGDGVDIVQWVRKMTDSNKEEVVKVLDPRLSSVPLQEVVHVFYVAMLCVEEQAVERPTMREVVQILTELPKSPGSKQGDIAIESSMSSAEGSTTQSKELKEETPQSRPADVLGI 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0401 1079 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 729 837 - -
Lele49g0401 1079 SMART serkin_6 760 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0401 1079 Gene3D Phosphorylase Kinase; domain 1 725 837 - -
Lele49g0401 1079 Pfam Leucine Rich Repeat 354 376 IPR001611 GO:0005515
Lele49g0401 1079 SUPERFAMILY L domain-like 369 684 - -
Lele49g0401 1079 Pfam Leucine rich repeat N-terminal domain 96 133 IPR013210 -
Lele49g0401 1079 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 838 1048 - -
Lele49g0401 1079 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 153 396 - -
Lele49g0401 1079 SUPERFAMILY Protein kinase-like (PK-like) 754 1031 IPR011009 -
Lele49g0401 1079 SMART LRR_typ_2 425 448 IPR003591 -
Lele49g0401 1079 SMART LRR_typ_2 159 183 IPR003591 -
Lele49g0401 1079 SMART LRR_typ_2 400 424 IPR003591 -
Lele49g0401 1079 SMART LRR_typ_2 352 376 IPR003591 -
Lele49g0401 1079 SMART LRR_typ_2 544 568 IPR003591 -
Lele49g0401 1079 SMART LRR_typ_2 640 663 IPR003591 -
Lele49g0401 1079 SMART LRR_typ_2 231 255 IPR003591 -
Lele49g0401 1079 MobiDBLite consensus disorder prediction 1036 1079 - -
Lele49g0401 1079 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 404 689 - -
Lele49g0401 1079 Pfam Leucine rich repeat 185 243 IPR001611 GO:0005515
Lele49g0401 1079 Gene3D Ribonuclease Inhibitor 426 689 IPR032675 -
Lele49g0401 1079 SUPERFAMILY RNI-like 140 462 - -
Lele49g0401 1079 Gene3D Ribonuclease Inhibitor 155 425 IPR032675 -
Lele49g0401 1079 Gene3D Ribonuclease Inhibitor 89 154 IPR032675 -
Lele49g0401 1079 Gene3D Transferase(Phosphotransferase) domain 1 838 1052 - -
Lele49g0401 1079 MobiDBLite consensus disorder prediction 1043 1059 - -
Lele49g0401 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Lele49g0401 1079 ProSiteProfiles Protein kinase domain profile. 760 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0401 1079 PANTHER OS05G0588300 PROTEIN 341 469 - -
Lele49g0401 1079 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 90 152 - -
Lele49g0401 1079 Pfam Protein tyrosine and serine/threonine kinase 762 1031 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0401 Lele-ChrLele49 2323281 2328433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0401 85 1056 Receptor kinase-like Gene Family AT5G65700 80.448 0.0 1576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele49g0401 PK_Tyr_Ser-Thr 1e-46 CL0016