Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0387 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGCCCATGGTCCCCTGAGGAAGACGCCAAGCTCAAGGCCCATATTGAGCAGCATGGCACCGGCGGCAACTGGATTGCCTTGCCCCAAAAGATAGGCCTTAAGAGATGTGGGAAAAGCTGTCGCCTACGATGGTTGAATTATCTTCGCCCAAACATCAGGCATGGGGGTTTCTCGGAGGAAGAAGACAACATAATCTGCAGCCTCTATCTTACTATTGGAAGCAGGTGGTCAATAATAGCATCACAATTACCAGGGAGAACAGATAATGATATAAAGAACTATTGGAACACTCGGTTGAGGAAGAAGCTGCTGGGTATGCAGCGCAAGGAACAACAGGCCCAAGCTCGCCCGAAGCTAGTCATGAAGAACGAAACTGAAAATCTGGTAACACATGTGACCCAAAATCCCACCTGGCCAGCCCATCTGTGCGTTCCAACATCTCAACCATATGATCCCAACCACGGCGACTTGCCAAATAAAGTAGAGGGAACATTCTCTCAGAATCACCAGCAATCATACTCAGACACACTTTTCCATACCATAAATTCCTACTACCAACTTCTCCAACCAGAGCAGCACCTATACCAAACCTCAATAAATTCGGCAACAGCACCGCCGGTGAATAATAGTAGTAGTAGCAGTTGTCAGTCGTCCAACGTTTTCGAAGGCTTTGAAAGCTTCGCTGATGATTATTGGGATTGGAGCGAGTTGGCGAGCATGAGGCCTCAACAACAACAACAACTAGATGATGCGACGTTTGAGGGTAATTACTATGTAATGGGAAGCAGCGTTGCAGCTTCAACAGAAAGCACAAGCTGGGGTGACGTCAGCTCTCACCTGCAGGTTTACTCTCCTCAGCTGGTTTCTGGATACGAAGGTGTCCAACAAGGAACGCCTCACGATATCGCTACCTACTTCGGAGTGCAATAG 972 0.4835 MGRAPCCDKANVKKGPWSPEEDAKLKAHIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIRHGGFSEEEDNIICSLYLTIGSRWSIIASQLPGRTDNDIKNYWNTRLRKKLLGMQRKEQQAQARPKLVMKNETENLVTHVTQNPTWPAHLCVPTSQPYDPNHGDLPNKVEGTFSQNHQQSYSDTLFHTINSYYQLLQPEQHLYQTSINSATAPPVNNSSSSSCQSSNVFEGFESFADDYWDWSELASMRPQQQQQLDDATFEGNYYVMGSSVAASTESTSWGDVSSHLQVYSPQLVSGYEGVQQGTPHDIATYFGVQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0387 323 PANTHER OS09G0431300 PROTEIN 1 283 - -
Lele49g0387 323 CDD SANT 71 113 IPR001005 -
Lele49g0387 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele49g0387 323 FunFam Transcription factor MYB36 70 140 - -
Lele49g0387 323 Gene3D - 69 142 - -
Lele49g0387 323 CDD SANT 16 62 IPR001005 -
Lele49g0387 323 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele49g0387 323 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele49g0387 323 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele49g0387 323 Coils Coil 110 130 - -
Lele49g0387 323 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele49g0387 323 SMART sant 67 115 IPR001005 -
Lele49g0387 323 SMART sant 13 64 IPR001005 -
Lele49g0387 323 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele49g0387 323 Gene3D - 7 68 - -
Lele49g0387 323 FunFam Transcription factor RAX3 7 68 - -
Lele49g0387 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0387 Lele-ChrLele49 2264060 2265227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0387 1 135 MYB Transcription Factor Family AT5G65790 85.294 2.68e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele49g0387 Myb_DNA-binding 1.5e-13 CL0123