Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0384 ATGCATGTGCCTAACGAAAGTATGTCTGTGAAGGGCCATTACCATAATCATTTCAGGAATATTATGTACTTTGATCAAGAGGGCAAAGTTTATCCTAAGCTTAACAAGTTTCATTCTCTAATCTCTTCTTCTCTCCATCTCAAAAGTGGTAGGCTGCCTGTGTTATATATTCCTGATAGCCGGCCAGATCAGGGCATTTATATTGCAAAGCATGCAGTGCCGAGACAAGTTACCCTAGATAGTACCGTCTTCCTTTACTACGCTCATGAACACATTCGTGAGGTCCAGAGGGAGATGTCCAGAAATGAAGTGACTGGAGGGACAGATGGTATTGCGCCCAGAAATATGAAGTCCGTGGAGAATGATGATGCCCCTGGTCATGAAAACAACTGGTTGGGTTTCTCTCTCTCCCCCCACATGAATCTAGATGTTCCTTCTGACTGTAATGACCAACACCAACAACACACACAAGTCACACGGCCTTCCTCCGCTGCTGCAGATGCTGTTCCGACGAGCTTTTATCCCTCCATGCCGCTTCCTCCTAATTATGGCATTTACTATGGTGGTCTTGAAGGTGAAAATGTCGGATTGTATTCGTCCCTTCCCGTCATGCCCCTAAAATCTGACGGCTCTCTCTACCTAATGCAGTCACAGCCTCAAGCAATGGTGTCGACTTCAGCCCCGAAACTGGAGAATTTCTTAGGCAGCTCAACCATGGGGACCTTGAGCTTAGACAGCATGATTTTTGCCAACCAATCCTCACGACGCGAACTCAACAACCCAAACTATCTGAACCGCGTCGAACAAGGGCAAGACGGTCAGGCTCAGCCTTTCGCATCGTACTATTCTGGCTTCAGAAGTCATGAAATGATGTTAGAAGGGCCCAAGCAGAATGAGGTTTCAGACTGTAATGTGTATGTCCCGAGTATTGGAGAGGAGGGAGTTTCTGGAATGAAGAGCTGGGGAATAAGAATCAACCCGGCGGGTCATGCACAGGAGTCGGAGATGGTGGTTAGCGTGGAGGATAACAACGGTGGCGAATCTGGACCGATAGGGTCAATGGCGTATGGCGATTTACAGTCACTGAGCTTGTCCATGAGTCCTGGCTCACAATCAAGCTGCGTCACAAGTTCACAGAGAGCATCACCTTCTGTCATTGATTCTGTGGGCGTGGATACAAAGAAAAGAGGGCCTGAAAAGTTTGACCAGAAGCAAATTATTCACCGGAAATCCATAGATACCTTCGGTCAAAGAACCTCCCAGTATAGAGGGGTAACAAGACATAGATGGACTGGTAGATATGAAGCACATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGGAAAAGCTGCGAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATATGTAGCTCATTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGCAGAGTGGCTGGAAACAAGGATCTATATCTTGGAACCTTCAGTACCCAGGAGGAAGCAGCTGAGGCATATGACATTGCAGCTATAAAGTTCCGTGGAGTAAATGCGGTGACTAACTTTGATATAACAAGATATGATGTGGACAAAATCATGGCTAGCAGTAATCTTCTTAGTGGTGAACTAGCCAGGCGGAACAGAGACATCGATGGTGGTAACGATCGAGCTATTATTCCTATAGGCACAGCATATGTTGAAAACCAGGATGCCATTTCAATGCGCAAGAGCTTGGAGGGCCAATCGTCAGAGTGGAAGCTGGGAACTCATATCTTAAATCGTTCTCAATGGATGATAGAACTGGACCAAAATCCACCAAGAATTGAGACTTATAGAACTCATCAGTCCTTCTCAACGCCTTTAGATAACATGATCCATCAGGTAGATGACTCAACCAAGATGGGAACTCACTTCTCAAATCCTTCGTCGTTAGTAACGAGCTTGAGCAGCTCACGCGAAGTTAGCCCTGATGGAACAAGCTTGCCAATTCTCACTGAAACGCCTTCGTTAGTGACAAGCTTGAGGCCTCCACTTTCATTGCCTCATGTGCCAGTTTTTGCTGCATGGACAGATGCTTGA 2244 0.4639 MHVPNESMSVKGHYHNHFRNIMYFDQEGKVYPKLNKFHSLISSSLHLKSGRLPVLYIPDSRPDQGIYIAKHAVPRQVTLDSTVFLYYAHEHIREVQREMSRNEVTGGTDGIAPRNMKSVENDDAPGHENNWLGFSLSPHMNLDVPSDCNDQHQQHTQVTRPSSAAADAVPTSFYPSMPLPPNYGIYYGGLEGENVGLYSSLPVMPLKSDGSLYLMQSQPQAMVSTSAPKLENFLGSSTMGTLSLDSMIFANQSSRRELNNPNYLNRVEQGQDGQAQPFASYYSGFRSHEMMLEGPKQNEVSDCNVYVPSIGEEGVSGMKSWGIRINPAGHAQESEMVVSVEDNNGGESGPIGSMAYGDLQSLSLSMSPGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEGKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVDKIMASSNLLSGELARRNRDIDGGNDRAIIPIGTAYVENQDAISMRKSLEGQSSEWKLGTHILNRSQWMIELDQNPPRIETYRTHQSFSTPLDNMIHQVDDSTKMGTHFSNPSSLVTSLSSSREVSPDGTSLPILTETPSLVTSLRPPLSLPHVPVFAAWTDA 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0384 747 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 224 604 - -
Lele49g0384 747 MobiDBLite consensus disorder prediction 692 716 - -
Lele49g0384 747 Coils Coil 485 505 - -
Lele49g0384 747 ProSiteProfiles AP2/ERF domain profile. 520 578 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 FunFam AP2-like ethylene-responsive transcription factor ANT 420 486 - -
Lele49g0384 747 Pfam AP2 domain 421 476 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 Pfam AP2 domain 521 570 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 SUPERFAMILY DNA-binding domain 420 486 IPR016177 GO:0003677
Lele49g0384 747 CDD AP2 420 484 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 SUPERFAMILY DNA-binding domain 519 579 IPR016177 GO:0003677
Lele49g0384 747 FunFam AP2-like ethylene-responsive transcription factor 519 580 - -
Lele49g0384 747 Gene3D AP2/ERF domain 420 486 IPR036955 GO:0003700|GO:0006355
Lele49g0384 747 Gene3D AP2/ERF domain 520 580 IPR036955 GO:0003700|GO:0006355
Lele49g0384 747 CDD AP2 519 580 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 PRINTS Ethylene responsive element binding protein signature 422 433 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 PRINTS Ethylene responsive element binding protein signature 560 580 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 ProSiteProfiles AP2/ERF domain profile. 421 484 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 SMART rav1_2 520 584 IPR001471 GO:0003700|GO:0006355
Lele49g0384 747 SMART rav1_2 421 490 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0384 Lele-ChrLele49 2230924 2236532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0384 349 747 AP2-EREBP Transcription Factor Family AT4G37750 55.069 1.19e-137 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele49g0384 AP2 1.7e-08 CL0081