LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele49g0364	ATGCAGAGGGAAATGGCTACCTGCAGTTCAAGCTCAAAGCCATCGGTGTGGCTGAGAAGCCAAAGAGAAAGCTGGCTTTCAGGCGCCCGTAGATTTCAGGCCTTCAATGTTGGGGCCAGAGCAAAATCTTGTGCTTGTATGTGGAGGTCCGAAACCGGAAAGAGAGCAGCAGCAGAATTTGTGGTGAGAGGATGCGGCGAAAGGGACCAAAACAGAAGAGATGGCTACGGCAGCGCCGATGAAGACCAAGAGTTCGTCAACGTCCTGCGAGAGGCTCAGCCTTATATCTCTATTCACAGAGACAGCGTCTTCGTCCTCCTCATTTCTGCCGAGATTATTGCCAGCCCTCACCTGGACGCCATTCTCAAGATGCATTGGCGGAAGAATAGAAAAACGGAACGCACCAAGATTGAGGAGCCAGTTATCTACTGGAATTCAGGACGAGGCTCTTCAAGTTTTTGCTCAAAGTTCGAATGTCTCCCCTTCTCCATGGCGGCTTCAATATCGAGTTCTCGCATTTGTCTTCACACTCCTCCCAAATCTTCAGATTTCCGCCCACGTACTGACCTGTGCTATTCTTCTCACAATTTATACCCGCAACTGAATGTAAAATTTCGTTCCCTAAAACCCTTAGCTGTAGCCGCCGACGAGAGAGCAAAGCTCAATAAGGGAGCCTCAACCAAATGCAATGTGTTCAGCGAAGAATTGGTAGAGAGCGCGGAAGACGAGAGCTACGGTGCAGTGGAAGACAAGCAATTTGTGCGCTGGTTTCGCGAGGCCTGGCCTTACTTATGGGCCCATAGGGGCGGCACCTTCGTCGTGATTATTTCCGGTGAAATTTTGGCTAGTCCTTTCTTAGATCCCATTCTCAAGGCAGCTTTCCTTCATCACCTGGGAATTCGGTTTGTTATTGTACCGGGAACCCATGTGCAAATAGACAAGCTTTTGACTGAGAGAGGGAGCAAACCTGAGTATGATGGTCGGTATAGGATTACTGATGATGAATCTCTTGCAGCTGCAATGGAAGCAGCTGGCAGAATCAGGTTAATGATAGAAGCAAAACTTTCTCCTGGACCGTCCATATGCAATATTCGTCGACATGGTGACAATAGTCGCTTGCATGAAGTTGGTGTCAGTGTTGCTAGTGGTAACTTCCTTGCGGCTAAGAGAAGAGGGGTTGTTGAGGGAATCGACTATGGGTCAACTGGAGAAGTTAAGAAAGTGGATGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGATGTATAGTTCTTCTAAGTAACCTTGGCTATTCCAGCTCCGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCAACTGCTTGTGCATTAGCTATTGGAGCAGACAAGCTTATTTGCATCATAGATGGTCCAATACTTGATGAGAATGGACGCCTTATTCGTTACTTGCCTCTTCAAGAAGCAGATTTGTTAGTTCGTAAACGGGCTGAGCAAAGTGAAATAGCTGCTAACTATGTCAAAGCTGTTGATGATGATAATTTCAGCTCTCTTGGTTATAAAAGTTCTAATGGAACAGCCCATTCCCCACCGAATGGATATGCTTGTACAAGAACCCATAATGCAACCTTTCATAATGGTGTTGGTTTCGACAATGGGAATGGCCTATGGTCTGGTGAACAAGGCTTTGCTATTGGAGGTCAAGAGCGGCTAAGTAGAATGAATGGTTACCTGTCAGAATTGGCTGCAGCAGCTTTTGTTTGCAGAGGAGGTGTTGAAAGAGTTCACTTATTGGATGGAACTATTAGTGGAGTTTTGCTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCCAGTGATCCGTATGAAGGCACTCGGACGGCTCGGGTTGCAGATGTTCCTGCAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGTGTATTGATTAAGAGGACCGAAGAGGAGTTGCATCAATCAGTGGATTCATTCTTTGTTGTGGAAAGGGAGGGTCAAATAATTGGTTGCGCTGCACTTTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCCATTGTAGTATCGCCAGACTGTCGAGGCCAAGGACAGGGTGACAAATTGCTTGACTATCTTGAGAAGAAGGCGTCGTCTCTTGGGTTGAACATGCTTTTCCTGCTTACGACTCGGACAGCAGATTGGTTTGTGAGACGCGGATTTTCAGAATGTTCAATTGATTATATACCGGAGAAGAGAAGGGGCAGAATTGATCTGTCCCGTAATTCCAAGTATTATATGAAGAGGCTTCAACCCGACAGAAGTGGAATTGCAGTTGGTAGAAAATTTTTACAGGATTAG	2343	0.4622	MQREMATCSSSSKPSVWLRSQRESWLSGARRFQAFNVGARAKSCACMWRSETGKRAAAEFVVRGCGERDQNRRDGYGSADEDQEFVNVLREAQPYISIHRDSVFVLLISAEIIASPHLDAILKMHWRKNRKTERTKIEEPVIYWNSGRGSSSFCSKFECLPFSMAASISSSRICLHTPPKSSDFRPRTDLCYSSHNLYPQLNVKFRSLKPLAVAADERAKLNKGASTKCNVFSEELVESAEDESYGAVEDKQFVRWFREAWPYLWAHRGGTFVVIISGEILASPFLDPILKAAFLHHLGIRFVIVPGTHVQIDKLLTERGSKPEYDGRYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVEGIDYGSTGEVKKVDVSRMRERLDGGCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDENGRLIRYLPLQEADLLVRKRAEQSEIAANYVKAVDDDNFSSLGYKSSNGTAHSPPNGYACTRTHNATFHNGVGFDNGNGLWSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVERVHLLDGTISGVLLLELFKRDGMGTMVASDPYEGTRTARVADVPAIKQLIQPLEASGVLIKRTEEELHQSVDSFFVVEREGQIIGCAALFPFFEEKCGEVAAIVVSPDCRGQGQGDKLLDYLEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKRRGRIDLSRNSKYYMKRLQPDRSGIAVGRKFLQD	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele49g0364	780	Pfam	Amino acid kinase family	273	481	IPR001048	-
	Lele49g0364	780	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	618	766	IPR000182	GO:0016747
	Lele49g0364	780	SUPERFAMILY	Carbamate kinase-like	251	485	IPR036393	-
	Lele49g0364	780	CDD	NAT_SF	659	721	-	-
	Lele49g0364	780	Hamap	Amino-acid acetyltransferase [argA].	252	764	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Lele49g0364	780	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	621	766	IPR016181	-
	Lele49g0364	780	Gene3D	-	617	764	-	-
	Lele49g0364	780	SUPERFAMILY	Carbamate kinase-like	566	617	IPR036393	-
	Lele49g0364	780	PANTHER	AMINO-ACID ACETYLTRANSFERASE	228	771	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Lele49g0364	780	CDD	AAK_NAGS-ABP	252	612	IPR033719	-
	Lele49g0364	780	Gene3D	-	251	616	IPR036393	-
	Lele49g0364	780	TIGRFAM	N-Ac-Glu-synth: amino-acid N-acetyltransferase	573	764	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Lele49g0364	780	Pfam	Acetyltransferase (GNAT) family	653	723	IPR000182	GO:0016747

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele49g0364	Lele-ChrLele49	2143618	2150588	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Lele49g0364		AA_kinase	2.9e-09	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele49g0364	49	2143618	2150588	Lele51g0378	51	2170562	2181619	hybridization
	Lele49g0364	49	2143618	2150588	Lele52g0393	52	2303531	2310069	hybridization