Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0361 ATGCTTAGAGATGTTGCCAACCGCTCACTGGCAAATGGCCTCAGCTTAGTTGGGTGGTTTACCGGCAGCATCACTGGCAACAGAATTCCATGTCCAAGACTTTTGCTCTTCTCGCAGTTTGGCGGCTACCTGGGAGAGAAGATGAGGATGAGGAACAAACACAGGAAATCAGCAACTTTACGTTGCCATGGAGGGAACAGATGCTCAATGCCTGTTGTGATATGGAGCTTGGTAGGTTGTCTTCTGTTGCTTAATTGGTTTTCCGATGTTCGCCACAAAGCCACAGAATATGGAAAGTTCAAATTTCTTGCAAGTCATCATCCTCTATTTCCTGAACTTCAACAAGTGGATGAGGAGAACATTCAAATTCCCCCACCCAGAGGAAAGAGGTCTCCTCGGGCAGAAAAACGCAGACCTAAGCGGCCAACGACACTGATAGATGAATTCCTGAATGAAGAATCTCAACTGAGACACATATTCTTTCCTGGGCAGGAGAATGCTATAGATCCCATGAAGGATAATGTAAATGATAGTTATTACTACCATCCTGGAAGAATTTGGTTGGACACTGATGGAAATCCCATTCAAGCCCATGGAGGGGGCATTCTGTTTGATAAAATATCAAGGACATACTATTGGTATGGTGAGTATAAAGATGGGCCCACCTATGAATCTCCCCAGAATGGAATTGCACGGGTGGACATTATAGGAGTTGGTTGCTATTCCTCCAAGGATTTGTGGACTTGGAAAAATGAGGGAATCGTCCTGGCAGCTCAGGAAACAGATGAAACCCATGATCTGCACAAGTCCAATGTACTGGAGAGGCCGAAAGTGATTTACAATGAGAAGACTGGAAAATATGTGATGTGGATGCATATTGATGATGCCAACTATACCAAGGCAGCTGTTGGGGTAGCAATCAGTGATACTCCTGATGGTCCTTTTGATTATCTTGGTAGCCAAAGACCGCATGGATGTGAAAGCAGGGATATGACGATTTTCAAGGATGATGATGGAGTGGCGTATCTCATATATTCCTCTGAGGACAATAGTGAACTGCACATAGGACCCCTGACTGAAGATTATCTCAATGTGACATCTGTCATGAGAAGGATTCTTGTTGGACAACGCAGGGAAGCGCCAGCCCTGTTCAAGCACCGTGGCACATATTACATGATTACATCAGGCTGCACTGGATGGGCCCCAAATGAGGCACTGGCTCATGCAGCTGAGTCAGTCCTGGGGCCTTGGGAGACATTGGGAAATCCATGCATTGGAGGAAACAAAGTGTTTCAAGAAACAACCTTCTTTGCTCAGAGCACCTTTGTTTTCCCTCTACCTGGGCTCCCAGGTTCATTCATTTTCATGGCGGATCGATGGAATTCTGCTGACTTAAGGGACTCGAGATATGTGTGGTTGCCTTTGATAGTGGCAGGACCTGCCGATCGGCCTCTGGAGTTCAATTTTGAATTCCCATTGTGGTCAAGAGTTTCTATCTATTGGCATAGAAAATGGAGACTGTCTCGGGTGGGTTGGGTTTAG 1542 0.4585 MLRDVANRSLANGLSLVGWFTGSITGNRIPCPRLLLFSQFGGYLGEKMRMRNKHRKSATLRCHGGNRCSMPVVIWSLVGCLLLLNWFSDVRHKATEYGKFKFLASHHPLFPELQQVDEENIQIPPPRGKRSPRAEKRRPKRPTTLIDEFLNEESQLRHIFFPGQENAIDPMKDNVNDSYYYHPGRIWLDTDGNPIQAHGGGILFDKISRTYYWYGEYKDGPTYESPQNGIARVDIIGVGCYSSKDLWTWKNEGIVLAAQETDETHDLHKSNVLERPKVIYNEKTGKYVMWMHIDDANYTKAAVGVAISDTPDGPFDYLGSQRPHGCESRDMTIFKDDDGVAYLIYSSEDNSELHIGPLTEDYLNVTSVMRRILVGQRREAPALFKHRGTYYMITSGCTGWAPNEALAHAAESVLGPWETLGNPCIGGNKVFQETTFFAQSTFVFPLPGLPGSFIFMADRWNSADLRDSRYVWLPLIVAGPADRPLEFNFEFPLWSRVSIYWHRKWRLSRVGWV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0361 513 MobiDBLite consensus disorder prediction 116 143 - -
Lele49g0361 513 Pfam Glycosyl hydrolases family 43 237 420 IPR006710 GO:0004553|GO:0005975
Lele49g0361 513 PANTHER GLYCOSYL HYDROLASE 43 FAMILY MEMBER 73 509 - -
Lele49g0361 513 SUPERFAMILY Arabinanase/levansucrase/invertase 193 476 IPR023296 -
Lele49g0361 513 CDD GH43_CtGH43-like 195 475 - -
Lele49g0361 513 Gene3D Glycosyl hydrolase domain; family 43 165 489 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0361 Lele-ChrLele49 2126847 2133024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0361 50 507 Glycoside Hydrolase AT3G49880 72.174 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0361 49 2126847 2133024 Lele53g0201 53 1679129 1681749 CCT
Lele49g0361 49 2126847 2133024 Lele54g0205 54 1761476 1764115 CCT
Lele49g0361 49 2126847 2133024 Lele55g1284 55 19316672 19325392 CCT
Lele49g0361 49 2126847 2133024 Lele56g1233 56 15677374 15680267 CCT
Lele49g0361 49 2126847 2133024 Lele49g0361 49 2126847 2133024 ECH
Lele49g0361 49 2126847 2133024 Lele51g0375 51 2155181 2158460 hybridization
Lele49g0361 49 2126847 2133024 Lele52g0390 52 2282890 2288594 hybridization