Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0354 ATGAAAGCTCATCATTTGAGCTTGCTTTTTATCATATTATTGTCTCCATCCTTCTTCGTCCCCACTGCAAAAGGGGTCAACACCACCCAATTCCGCACTGTCAATGAATCTCAGTCAAGAAGAATTCTGCACCAACCATTGTTTCCGGCGACTTCTGCTCCACCGCCAGGCACCGACTCGCCTCCACCACCGCCACCTTACACTACTCCCCCTTCTCCCAACACCGACATTCCCTTCTTTCACGAGGATCCTGCGGGGCCACCTCCAAATCAGAATCAGTCACTACCTTCGATTCCCAATGCCACAATTGCGAACCCAACAGCAACACAACCGACCAAGCCAACAAAGAAGGTCGCAATTGCAATCTCTGTCGGAATTGTCACGCTTGGCATGCTCTCGGCTCTTGCCTTCTTCTTGTACAGACATCGGGTGAGGCAACCAATCGAGACCCAGAAGCTCGTCGGTGGGGATTCTCAGACGATTCCTGACGATCCAAGGGTGCCACCATCGAGCTTTCTCTATATTGGGACCGTGGAACCAAGCCGAACGTCAGTGGCCAACGCAAGTGAGACCAATGGGGCAAACAGGTCCCCGTATCACAAGCTCAATTCTTTTAAGCGATCCGAAAGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGGTGTTGAGTAAGCCTCCAGATGGGAATTACCCACCGGCGGTGTCTTCATCATCCTCCTCCGACGAGGAAAGCCACGACACGGTGTTTCATTCCCCACAGGGGTCATCATTGAGTTATGAGGACAGCTATTACACCCCAGCTTCGCGTCATAGTTCTCTGGCTAATGGGGGCAAGTCAGCTTCTGTCAAGAGTGAGACCTATTCGGCTACTTCAATCCCATATTCAAAGATAACTTCACCGACATCTCGGCTTGCGGCTTCAACGCCGGATATTAGGCAAGTCATGATCCCACCAATTAAGCAGGCTCCGCCTGTGACGGCACCTGGTCCTCCCCCGCCAGCACCACCACTTTCACAGCCGTATCAGCATCAGGACAAAGAAGTGACCGACGGTCATTCCAGGAGACCAAAATTCTCAGCGCCTCCGCCAGCGCCTAATTTGACGCGTCTTCAGTCAACTAACACCACGCCCCAAAACATATCTAGGACTTCCCTCCATTCTCATCCTCCTCCTCCTCCGCCTCCTCCCCCACCTCCACCACTGCAATTGAAGCCGCGCAAAGCAGGGTCTCCAGCAACCAGCGTTTCCTCATCCTCTGCAACAAGGCACCAACAATCTTGCTCTCTGAGACAAGGAGCCGGTTCTGCGAATTGTGTGACAAAATCTTCAGAAAACGGTGATCCAAGTCTCAGCTCTTCTGGGAGGCTTGAAGCAGAAGACACGGAAGGAGCAAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTACGCGCGACTTCAGACCGCGCTACAGTGTGGGACCAACTAAAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAAACCTTGTTTGGCTGCAATGCCAAGAAACCCGCCCCTAAAGAGCCCATTCGAAGATCCGTTCTTCCACCTGTTGAACAGGAGAACAGAGTGTTAGACCCGAAGAAGTCTCAAAACATAGCTATACTACTAAGGGCACTGAATGTGACAAGAGATGAGGTGTCTGATGCCCTTCTAGATGGGAATCCTGAAGCGTTGGGTGCAGAACTTTTGGAAACTTTAGTAAAAATGGCTCCCACTAAGGAGGAAGAAATAAAACTAAAAAACTATGGTGGTGACCTCTCTAAACTAGGGTCAGCTGAAAGCTTTCTTAAACAGGTACTTGATGTCCCTTTTGCCTTCAAAAGAGTTGAAGCCATGCTATACAGAGCCAACTTTGATGCAGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTTGAGGTAGCAAGTGAGGAATTGAAAAATAGTCGGTTGTTCCTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACCGAATGAATGTGGGAACCAATCGAGGTGATGCTAAAGCTTTTAAGCTGGACACACTCTTAAAACTTGCAGACATAAAGGGAACAGATGGAAAGACTTCATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAAATGGAAATATTCAGAACCAAGTGAATTCCAAATTCAGTGAGGACCAATTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGGCTCAGCAGGGACCTCAGCAATGTCAAAAAAGCAGCAGGAATGGATTCTGATGTCTTGAGCAGCTACCTCTCAAAACTTGAAAAGGGTCTTGATAAAGTGAGAGTGGCTTTGCAACATGAGAAACCGGATATGCAAGGGAATTTCTTCCACTCCACGCAGCTATTTTTGAAAAATGCGGAAGAGGAAATCGTTAGAATTAAGGCTGATGAACGAAGGGCCTTATTTCTTGTGAAAGAAGTTACAGAATACTTTCACGGGAATGCAGCCAAGGAAGAAGCCCACCTTCTCAGAATCTTTATGATTGTTAGGGATTTCTTAAATATCTTGGACCAGGTATGCAAAGAAGTGGGAAGGATGCAGCATGATAGAACCGTGATTGGTTCTTCCAGATCCTTCCGGATAGCTGCAAGTGCGTCATTACCAGTTCTAAACAGGTACAATGCGAGACTAGATAGAAGTTCAGATGAAGAAAGCTCGTCACCCTAG 2712 0.4794 MKAHHLSLLFIILLSPSFFVPTAKGVNTTQFRTVNESQSRRILHQPLFPATSAPPPGTDSPPPPPPYTTPPSPNTDIPFFHEDPAGPPPNQNQSLPSIPNATIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYRHRVRQPIETQKLVGGDSQTIPDDPRVPPSSFLYIGTVEPSRTSVANASETNGANRSPYHKLNSFKRSERYRPSPELQPLPVLSKPPDGNYPPAVSSSSSSDEESHDTVFHSPQGSSLSYEDSYYTPASRHSSLANGGKSASVKSETYSATSIPYSKITSPTSRLAASTPDIRQVMIPPIKQAPPVTAPGPPPPAPPLSQPYQHQDKEVTDGHSRRPKFSAPPPAPNLTRLQSTNTTPQNISRTSLHSHPPPPPPPPPPPPLQLKPRKAGSPATSVSSSSATRHQQSCSLRQGAGSANCVTKSSENGDPSLSSSGRLEAEDTEGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNAKKPAPKEPIRRSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSDALLDGNPEALGAELLETLVKMAPTKEEEIKLKNYGGDLSKLGSAESFLKQVLDVPFAFKRVEAMLYRANFDAEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLADIKGTDGKTSLLHFVVQEIIRSEGANGNIQNQVNSKFSEDQFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLEKGLDKVRVALQHEKPDMQGNFFHSTQLFLKNAEEEIVRIKADERRALFLVKEVTEYFHGNAAKEEAHLLRIFMIVRDFLNILDQVCKEVGRMQHDRTVIGSSRSFRIAASASLPVLNRYNARLDRSSDEESSSP 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0354 903 MobiDBLite consensus disorder prediction 250 309 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 322 340 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 387 406 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 154 174 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 49 73 - -
Lele49g0354 903 Pfam Formin Homology 2 Domain 462 851 IPR015425 -
Lele49g0354 903 MobiDBLite consensus disorder prediction 366 386 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 410 457 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 187 464 - -
Lele49g0354 903 PANTHER FORMIN-RELATED 8 897 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele49g0354 903 ProSiteProfiles Formin homology-2 (FH2) domain profile. 459 878 IPR015425 -
Lele49g0354 903 MobiDBLite consensus disorder prediction 187 201 - -
Lele49g0354 903 MobiDBLite consensus disorder prediction 36 112 - -
Lele49g0354 903 Gene3D Formin, FH2 domain 456 863 IPR042201 -
Lele49g0354 903 MobiDBLite consensus disorder prediction 95 112 - -
Lele49g0354 903 SMART it6_source 459 866 IPR015425 -
Lele49g0354 903 SUPERFAMILY Formin homology 2 domain (FH2 domain) 391 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0354 Lele-ChrLele49 2089005 2092691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0354 399 893 FH2 protein (formin) Gene Family AT5G67470 69.014 0.0 663
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0199 53 1663091 1666959 Lele49g0354 49 2089005 2092691 CCT
Lele54g0203 54 1744947 1751180 Lele49g0354 49 2089005 2092691 CCT
Lele55g1286 55 19337335 19341211 Lele49g0354 49 2089005 2092691 CCT
Lele56g1235 56 15691696 15697320 Lele49g0354 49 2089005 2092691 CCT
Lele49g0354 49 2089005 2092691 Lele49g0354 49 2089005 2092691 ECH
Lele49g0354 49 2089005 2092691 Lele51g0367 51 2110602 2114278 hybridization
Lele49g0354 49 2089005 2092691 Lele52g0380 52 2235899 2239563 hybridization