Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0344 ATGACGCAGTTCACACCTTCTCTTCCTTCTTTGCACCAAATCACCACCCCTTTCTCCGGTCTTGCCATGAACAAGAATAATCAAATCCCCAGGACGCGACCTTGGCCTGGATTCCATTCCTCCAAGGCCTTCAATTCCTTCGGTGATACTAACTGCATGGAACAATTACTTGTTCACTGCGCCAACGCCATTGAATCCAACGACGTCACTCTTGCCCAGCAGATCCTCTGGGTTTTGAACAACATCGCTCCCCCCGACGGCGACTCCAATCAACGCCTTGCCTCCGCCTTCAATCGCGCTCTCGCCGCCCGTGCTGCCAAATCCGGCAGCTGCAAGATGCTTGCTGTTGTGGCGGACGCTCACACCAACCTCGCCGCTATAGACATTCACAACTTCTCCGTCGTCGAGCTCGCCAACTTCGTCGACTTAACCCCTTGGCACCGATTTGGCTTCACTGTGGCTAACTCGGCCATTCTAGAAGTCACCGAGGGATATTCAGTTATACACATCGTCGACTTGAGCTCCACGCATTGCATGCAGATTCCTACGCTCATCGACGCTATCGCTACTCGCCACGAGGTCCCTCCTTTAATTAAGCTCACAGTAGCTGGTTCTAACAACGACATCCCTCCTATGCTTAATCTTTCCTACGACGAACTGGGCTCCAAGTTGGTCAGCTTCGCGAGGTCTAAGAACATAATATTGGAATTCAAAGTGATTTGGTCGAGTTATAAAGACGGCTTCGTGGCTCTGATCGAACACCTTCGGGTGCAACAGATGGTTTTGGCGGCAGAAGGTCACAGAAGGGAAGCTTTGGTGATAAACTGTCACATGATGCTCCATTACATCCCCGACGAAACCATATCCACAGTACTAACCCCAGAATCAGACCATTCAATTTCAACAACCTCTTACATTTACGAGTCATCGTCGATGCGATCCATGTTTCTGAGAGCGGCGAGGAGCTTAGAGCCGACGATTGTGGTATTAGTAGACGAAGATGCGGATTTGACATCGAACAATCTGGTGAGCAGGCTGAGGTCTGCGTTTAACTACCTGTGGATACCATACGACACGGTGGACACGTTCTTGCCGCGAGGGTGCCGGCAACGGCAATGGTACGAGGCGGATATAAGCTGGAAGATAGAGAACGTGATTGCGCAGGAAGGGTTACAGAGGGTGGAGAGGGTGGAGCCAAAGAACAGGTGGGAACAAAGGATGAGGAATGCGAAGTTTCAAGGGGTTGGGTTGAGTGAAGAAGGGGTTTCAGAAGTGAAGGCGATGCTTGACGAGCATGCAGCTGGGTGGGGATTGAAGAAGGAGGACCAACATCTTGTTCTTACCTGGAAAGGACACAATGTTGTTTTTGCCTCTATTTGGATGCCTTCTTGA 1392 0.5072 MTQFTPSLPSLHQITTPFSGLAMNKNNQIPRTRPWPGFHSSKAFNSFGDTNCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPPDGDSNQRLASAFNRALAARAAKSGSCKMLAVVADAHTNLAAIDIHNFSVVELANFVDLTPWHRFGFTVANSAILEVTEGYSVIHIVDLSSTHCMQIPTLIDAIATRHEVPPLIKLTVAGSNNDIPPMLNLSYDELGSKLVSFARSKNIILEFKVIWSSYKDGFVALIEHLRVQQMVLAAEGHRREALVINCHMMLHYIPDETISTVLTPESDHSISTTSYIYESSSMRSMFLRAARSLEPTIVVLVDEDADLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGCRQRQWYEADISWKIENVIAQEGLQRVERVEPKNRWEQRMRNAKFQGVGLSEEGVSEVKAMLDEHAAGWGLKKEDQHLVLTWKGHNVVFASIWMPS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0344 463 Pfam GRAS domain family 53 460 IPR005202 -
Lele49g0344 463 ProSiteProfiles GRAS family profile. 44 461 IPR005202 -
Lele49g0344 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 449 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0344 Lele-ChrLele49 2020400 2021791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0344 38 462 GRAS Transcription Factor Family AT3G49950 57.477 2.39e-173 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele49g0344 GRAS 2.6e-91 CL0063