Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0337 ATGGGAGGAGGCAATGGGCAAAAGTCGAAGATGGCGCGGGAGAGGAACATGGAGAAGAATAAGGCCGCAAAGGGGAGCCAGCTGGATTCAAACAAGAAAGCGATGACCGTCCAGTGCAAGGTGTGTATGCAAACCTTCATCTGCACCACATCGGAGGTGAAGTGCAAGGAGCATGCTGAAGCCAAACACCCAAAGTCTGATCTTCATACTTGCTTTCCCCATCTTAAAAAGTGA 234 0.5 MGGGNGQKSKMARERNMEKNKAAKGSQLDSNKKAMTVQCKVCMQTFICTTSEVKCKEHAEAKHPKSDLHTCFPHLKK 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0337 77 PANTHER OS07G0114300 PROTEIN 1 77 IPR039713 -
Lele49g0337 77 Gene3D - 1 77 IPR026939 -
Lele49g0337 77 Pfam Zinc-binding 38 75 IPR039438 -
Lele49g0337 77 MobiDBLite consensus disorder prediction 1 32 - -
Lele49g0337 77 MobiDBLite consensus disorder prediction 11 26 - -
Lele49g0337 77 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 76 - -
Lele49g0337 77 Pfam 4F5 protein related disordered region 3 35 IPR007513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0337 Lele-ChrLele49 1983071 1984309 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0183 53 1524638 1525294 Lele49g0337 49 1983071 1984309 CCT
Lele54g0186 54 1584662 1585318 Lele49g0337 49 1983071 1984309 CCT
Lele55g1302 55 19477412 19478068 Lele49g0337 49 1983071 1984309 CCT
Lele56g1250 56 15841263 15842129 Lele49g0337 49 1983071 1984309 CCT
Lele49g0337 49 1983071 1984309 Lele49g0337 49 1983071 1984309 ECH
Lele49g0337 49 1983071 1984309 Lele52g0362 52 2120908 2125134 hybridization