Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0332 ATGTTCCCTTGTCCAATCTGTAGAGCTCACGGTTTCAGTAGTAGCTCGGAGTCAACTGGGACCGATTTCCCGGTGGAAAATGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAGATCAAAGCTTCTTTTCGCAGGTTGGCCAAGGAAACTCACCCTGACCTTGCTGACTCAAATAACAATTCATCTACGTCGCGACAATTTGTGCAAATCCTGGCTGCCTACGAGCTGTCCGTTGCTCATGCCTGTGTCATATCAATATTACTGGAAGAGTTTTGCAATGCCAGCGATGCTGTACATGGTCTTTCAGATGTTATTCTTTCAGATTCCAAGAAGAGAGCTCATTATGACAGATACCTTTTGTCTCAAAAGAAGCTTGTGGAGAAACATACTGGGCAGGGTTCAAAATTACACTTCTATAGATCACATGAAACAACTTCCAACGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAATGATATTTTGTCAGAGAAGAGGGTAGTAGTTGGAACTGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCAGCCATTCACGCTGCTTACTTTGGCCCTGAAATTGAGTCAATGGAGCTTTTTCCTGAGTGCTTTGAGGCTGAAGAAAGGTCCTCTTGTGAAACACCAGAGATTTTGCATATAGTATCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCCAATAAGAACCCAGAGATATCATCTACTAATAATGAAAAGTTAACTTCTTTCAGATCCTTCCATCCAGGCCTATGTCAATCTATAAAGAATGCAAACATCCACACTAATGCAGAAGTTCCATATGGATTTGGAATTCCACAAATTCATGACTCTAGAATATCAAGTCATATATCAGATGCATATAGAGATCTAGAGTTGCATGTCTCTGGAAGTGTGGTTGCTGTGGCCTCCAGGGTCCCTCCTGGAAGCTATTCTGATGCTGAAGTTGCAGAAGATCGCATTCATGTTTATCTTAATTCAGATGAATACACCAAGCATACCAACAACTGTGATTCTAAAAATGACTTCACAAGTAAATCAGCTGTTGCACGAATTCATATAGGAACCATAGCTGGGCTTGGGACCAGTCCAGACGAAAGTTCATGTGAAGCACATGCACTGGTATCAAGTTGGAGAAAAAAATTCTGTTTGAGTGTAGATGCACTAGAGCCAAATTACCACCAAGCAAGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAAGGTCGAACAATCCCATCACAAAGGTTATGGGATGGCTGGAATGATGGTCAGCACTTTGAGAGAAGACTTCATCCAGCAATGTATCTACTTGCTCTTGCATATAGGACACTTGATCTTGAATATGCCAAAGTTATTGGGCTCACTCCTAATGTTTATCTAGTGATTTCAGAAGAGTTGACTTGTGATTGTGAAGCGGCATTGACGCTCTATACTGTTGTTGATGTTTCAAGATGA 1503 0.4138 MFPCPICRAHGFSSSSESTGTDFPVENAYELLGVSQTSSFAEIKASFRRLAKETHPDLADSNNNSSTSRQFVQILAAYELSVAHACVISILLEEFCNASDAVHGLSDVILSDSKKRAHYDRYLLSQKKLVEKHTGQGSKLHFYRSHETTSNEMEVVEWLKWYRLAINDILSEKRVVVGTGYFDVLERDFYSAIHAAYFGPEIESMELFPECFEAEERSSCETPEILHIVSGRDLFGMVCLANKNPEISSTNNEKLTSFRSFHPGLCQSIKNANIHTNAEVPYGFGIPQIHDSRISSHISDAYRDLELHVSGSVVAVASRVPPGSYSDAEVAEDRIHVYLNSDEYTKHTNNCDSKNDFTSKSAVARIHIGTIAGLGTSPDESSCEAHALVSSWRKKFCLSVDALEPNYHQARGWYVETYGKDKKGRTIPSQRLWDGWNDGQHFERRLHPAMYLLALAYRTLDLEYAKVIGLTPNVYLVISEELTCDCEAALTLYTVVDVSR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0332 500 PRINTS DnaJ domain signature 47 62 IPR001623 -
Lele49g0332 500 PRINTS DnaJ domain signature 29 47 IPR001623 -
Lele49g0332 500 Gene3D DnaJ domain 24 140 IPR036869 -
Lele49g0332 500 ProSiteProfiles dnaJ domain profile. 27 123 IPR001623 -
Lele49g0332 500 SUPERFAMILY Chaperone J-domain 26 79 IPR036869 -
Lele49g0332 500 Pfam DnaJ domain 27 79 IPR001623 -
Lele49g0332 500 CDD DnaJ 27 79 IPR001623 -
Lele49g0332 500 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 407 466 - -
Lele49g0332 500 SMART dnaj_3 26 115 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0332 Lele-ChrLele49 1956259 1959873 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0332 49 1956259 1959873 Lele49g0332 49 1956259 1959873 ECH
Lele49g0332 49 1956259 1959873 Lele51g0346 51 1973323 1976816 hybridization
Lele49g0332 49 1956259 1959873 Lele52g0357 52 2098397 2102638 hybridization