Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0330 ATGGACCACAAAACCAGCTCTTTTTCCATACGCCTGCTGAACCTTGAATCGTCCAATTCCAGAGACACAGAGAGTTCTGTTCTCACTAACTCGTCTCGTGAAGACCAAGCTCAAGTTCTTACTTCTCCTTCTGCAACTTATGTTGGGATATATGACGGACATGGCGGCCCGGAAGCTTCCCGTTTCATCACCAACCATCTTTTCCCCATTCTCCAGAAGTTTGCGTCTGAAGAAGGCGGGCTATCGGAGGACGTGATAAAGAAAGCCTTTAATGAAACCGAGGAGGAATTCTTACAGTTTGTGAAGCAATCAGTGACTAATCGGCCGCAGATTGTTTCAGTGGGTCTTGGTAAGAAAGTTAATTGTTCTGTTGTGGCAGAACGTTTGTCCACTGATCATAATGCTGCAGTGGAAGAGATTAGAAAGGAAGTTATGGCACTTCACCCCGATGATGCGCACGTTGTGGTTCACACTCAGGGAGTTTGGAGAATCAAGGGCATCATTCAGATGATTGAGCTCCTTGAAATGATGACCAGGTCTCCATATAATTGCCATCATACATCCTTCGTCTGCTGGAAAATGCAGCACAACTCGAAACTTGACGCAAAAACTCCTTCACTGTAG 624 0.4567 MDHKTSSFSIRLLNLESSNSRDTESSVLTNSSREDQAQVLTSPSATYVGIYDGHGGPEASRFITNHLFPILQKFASEEGGLSEDVIKKAFNETEEEFLQFVKQSVTNRPQIVSVGLGKKVNCSVVAERLSTDHNAAVEEIRKEVMALHPDDAHVVVHTQGVWRIKGIIQMIELLEMMTRSPYNCHHTSFVCWKMQHNSKLDAKTPSL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0330 207 ProSitePatterns PPM-type phosphatase domain signature. 47 55 IPR000222 GO:0043169
Lele49g0330 207 SUPERFAMILY PP2C-like 30 170 IPR036457 -
Lele49g0330 207 Pfam Protein phosphatase 2C 40 99 IPR001932 -
Lele49g0330 207 Gene3D - 5 180 IPR036457 -
Lele49g0330 207 PANTHER PROTEIN PHOSPHATASE 24 170 - -
Lele49g0330 207 SMART PP2C_4 16 192 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0330 Lele-ChrLele49 1941547 1943859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0330 27 170 PP2C-type Phosphatase Gene Family AT5G06750 43.353 5.01e-42 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0330 49 1941547 1943859 Lele50g0348 50 1994901 1997970 ECH
Lele49g0330 49 1941547 1943859 Lele49g0330 49 1941547 1943859 ECH
Lele49g0330 49 1941547 1943859 Lele51g0344 51 1957834 1960771 hybridization
Lele49g0330 49 1941547 1943859 Lele52g0353 52 2079784 2082742 hybridization