Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele49g0325 | ATGCCTCGCCAAGATCACGAGCATGAACAACCACTGTTAGTGGACTCTGACAAACAAACTACCGAAGCCGCTTACGATTCCTCCGAAAAAGTCGTGGTCGTTGGCATCGACGAGTCCCACCCTGACTACGACGGCTGTGATCGCGCCCCGCCGTTTTCATGGAAGAAGCTTTGGCTCTTCACTGGTCCTGGTTTTCTCATGAGCATTGCCTTTCTCGATCCTGGAAATCTTGAGGGAGATCTTCAGGCTGGCGCAATTGCTGGCTACTCCCTCTTATGGCTTCTCATGTGGGCTACAGTTATGGGGCTTCTGGTTCAGCTTTTGGCGGCACGGCTTGGAGTGGTGACTGGGAAGCATCTGGCTGAACTCTGCAGGGAGGAGTATCCAACTTGGGCGAGGATGGTACTGTGGGTTATGGCGGAGTTGGCTCTGATTGGGTCTGACATTCAAGAGGTTATTGGTAGCGCTATTGCTATCAGAATTCTAAGTAACGGGATTGTGCCTCTTTGGGCGGGGGTCATCATCACAGCTTGTGATTGTTTTATTTTCCTATTTCTTGAGAACTACGGTGTGAGGAAATTGGAAGCATTTTTTGCTGTTCTCATTGGTGTAATGGCCATCTCATTTGCGTGGATGTTTGGTGAAACAAAGCCTAGCGGCAAAGATCTTCTTATTGGTATTTTGGTTCCGAAACTTAGCTCCAGAACAATACAGAAGGCTGTTGGAGTAGTGGGTTGCATTATTATGCCTCACAACGTATTCTTGCACTCTGCACTTGTTCAGTCAAGACAGGTTGAGCAGAGCAAGAAAGGCCGAGTTCAGGAAGCACTTAATTATTATTCTATAGAGTCAACCGCTGCCCTTTTTGTCTCCTTTATCATTAATGTATTTGTCACGACTGTGTTTGCAAAGGGTTTTTATGGTACTGACCTTGCAGATAGTGTTGGTCTTGTGAATGCTGGGCAGTATCTTGAAGAAAAATATGGAGGTGGACTTCTGCCAATCTTATATATATGGGGTATTGGGTTATTAGCAGCGGGTCAAAGTAGCACTATTACTGGGACTTATGCTGGACAGTTTATAATGGGGGGCTTTCTTAATTTAAGGTTGAAAAAATGGATGAGGTCGTTAATTACACGAAGTTGTGCTATCATCCCAACCGTGACAATTGCTCTTGTCTTTGAAACATCAGAGGACTCGTTAGATGTTCTAAATGAATGGCTTAATGTTCTCCAGTCAATTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTCTGGTGTCCAAGGAGCACATAATGGGCGCTTTCAGAATTGGCCCTGCCCTCAAGACTATTGCATGGTTCGTGGCTGCTCTGGTGATAGCGATCAATGGGTATCTTATGCTGGAATTCTTCAACTCTGATGTCAATGGAGTAATATTTGGTGCTGTCGTGTGCGCTTTTGTGGCTGCATATGTTGCATTCATACTTTACCTTGTTTCAAGGGCCATCACCTTTTCACCAAGGCAAAGCTCAACACAATCAAAGATAATTGCTAACTCACAGAATTAA | 1551 | 0.4513 | MPRQDHEHEQPLLVDSDKQTTEAAYDSSEKVVVVGIDESHPDYDGCDRAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATVMGLLVQLLAARLGVVTGKHLAELCREEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIRILSNGIVPLWAGVIITACDCFIFLFLENYGVRKLEAFFAVLIGVMAISFAWMFGETKPSGKDLLIGILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSRQVEQSKKGRVQEALNYYSIESTAALFVSFIINVFVTTVFAKGFYGTDLADSVGLVNAGQYLEEKYGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRSLITRSCAIIPTVTIALVFETSEDSLDVLNEWLNVLQSIQIPFALIPLLCLVSKEHIMGAFRIGPALKTIAWFVAALVIAINGYLMLEFFNSDVNGVIFGAVVCAFVAAYVAFILYLVSRAITFSPRQSSTQSKIIANSQN | 516 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele49g0325 | 516 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 49 | 500 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | TIGRFAM | nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 55 | 433 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | Pfam | Natural resistance-associated macrophage protein | 78 | 439 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 191 | 212 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 409 | 428 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 240 | 263 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 375 | 392 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 136 | 162 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 166 | 185 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | PRINTS | Natural resistance-associated macrophage protein signature | 347 | 366 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Lele49g0325 | 516 | Hamap | Divalent metal cation transporter MntH [mntH]. | 41 | 465 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele49g0325 | Lele-ChrLele49 | 1921308 | 1924029 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele49g0325 | 1 | 509 | Inorganic Solute Cotransporters | AT2G23150 | 75.882 | 0.0 | 797 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele49g0325 | 49 | 1921308 | 1924029 | Lele53g0166 | 53 | 1385059 | 1387746 | CCT | |
Lele49g0325 | 49 | 1921308 | 1924029 | Lele54g0167 | 54 | 1439657 | 1443733 | CCT | |
Lele49g0325 | 49 | 1921308 | 1924029 | Lele55g1317 | 55 | 19612602 | 19615264 | CCT | |
Lele49g0325 | 49 | 1921308 | 1924029 | Lele56g1267 | 56 | 15972295 | 15978901 | CCT | |
Lele53g0170 | 53 | 1411892 | 1416402 | Lele49g0325 | 49 | 1921308 | 1924029 | CCT | |
Lele54g0171 | 54 | 1462802 | 1464861 | Lele49g0325 | 49 | 1921308 | 1924029 | CCT | |
Lele55g1313 | 55 | 19585144 | 19586200 | Lele49g0325 | 49 | 1921308 | 1924029 | CCT | |
Lele56g1264 | 56 | 15953287 | 15955343 | Lele49g0325 | 49 | 1921308 | 1924029 | CCT | |
Lele49g0325 | 49 | 1921308 | 1924029 | Lele49g0325 | 49 | 1921308 | 1924029 | ECH | |
Lele49g0325 | 49 | 1921308 | 1924029 | Lele51g0338 | 51 | 1936339 | 1939062 | hybridization |