Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0324 ATGGCCATTGACTGTGGTTTACCATCCCCTCTTGGACCTCTTGCCTGCGAGAAGGACGCTAAGGCTTTGCAGTTCATACAAGAGATGACCCAAAATACTGATTCCGTCCAAGAGAGGGTTTTGACCGAGATTCTGAGCCGAAACGCCGACACGGAGTATCTACGGCCGTTTCACCTCAACGGAGCCACAGACCGCGACACTTTTAAGTCCAAGGTTCCTGTTGTTACGTACGAGGATTTGCAGCCTGATATCCAACGCGTCGCTAACGGCGATCGCTCCTCCATCTTTTCCTCTCACCCAATCTCCGAGTTCCTCACTAGTTCTGGAACATCAGCTGGTGAGAGAAAATTAGTGCCAACCATCAGCGAAGAAATGGACCGTCGTCAGCTACTGTACACTCTCCTGATGCCTGTGATGAACCTGTACATGCCTGGGTTGGACAAAGGGAAGGGCCTTTACTTTCTGTTCATCAAGGCGGAGACGAAGACTCCAGGAGGACTAGTGGCTTGTCCCGTTCTCACCAGCTATTACAAGAGCCAACAGTTCAAGAACCGACCCTATGACCCACACAACGTTTACACTAGCCCAAACGAAGCCATACTTTGCCCCGATTCCTTCCTAAGCATGTACACTCAGATGTTATGTGGCCTCATCATGCGCCACGAAGTGCTTAGAGTTGGAGCCGTTTTTGCCTCCGGCCTTCTCAGAGCCATCCGATTCCTTCAGCTAAACTGGCAACAACTAGCCCTTGATATCTCCACCGGAACCCTCAACCCCAAAATCACTGACCCTTCTCTTAAGGATTGCATGGCGAAAATCCTCAAACCCGACCCGGAACTCGCAGATTTCATAACAAAAGAATGCTCCGGTGGAAACTGGGAAGGTATCATCACCAGAATCTGGCCTAACACAAAGTACCTTGACGTGATCGTCACGGGCGCTATGTCTCAGTATATCCCCACCCTGGACTATTACAGTGGTGGCTTGCCCAAGGCTTGTACCATGTACGCATCTTCCGAGTGCTACTTTGGGCTGAACCTAAACCCTATTTGCAAGCCTTCTGAGGTGTCCTATACCATCATGCCAAACATGGGTTACTTCGAGTTCTTGCCACATGATGACTCATCATCCGCTTCTTCAACTCTGGCACGAGACTCGCCGCCTCGCCTTGTGGACCTAGCCGACCTCGAAGTTGGTAAATACTACGAGCTCGTTATCACCACCTACTCTGGCCTATGCCGTTATCGTGTGGGCGATATCCTCCAAGTCACGGGGTTCCACAACAAAGCTCCACAGTTCCGATTCGTGAGGAGAAAGAACGTGCTCTTGAGCATTGACTCCGACAAAACCGACGAGGCCGAGCTTCAAAAGTCCATTGAAAACGCCTCGGTGTTACTGAAAGAATTTAAGACCAGCGTGGTGGAGTACACGAGCTTTGCTGACACAAAGAGCATTCCGGGACATTATGTTATTTACTGGGAATTGTTGATGAAGGACCCCTCTAACCCGCCTACCAATGAAGTGCTGAACCGGTGCTGCCTAACCATGGAAGAGAGCCTTAACTCTGTTTATAGACAAGGGAGAGTAGCGGACCACTCTATTGGACCGTTAGAGCTACGAGTGGTGAAGAATGGTACCTTTGAGGAACTGATGGACTACGCCATCTCAAGGGGTGCCTCTATCAACCAGTACAAAGTACCGAGGTGTGTTAGTTTCACTCCTATAATGGAACTACTCGACTCTAGAGTGATCTCTGTTCATTTTAGCCCAGCTGCTCCCCACTGGACCCCCGAACGTCGTCGTTGA 1806 0.5022 MAIDCGLPSPLGPLACEKDAKALQFIQEMTQNTDSVQERVLTEILSRNADTEYLRPFHLNGATDRDTFKSKVPVVTYEDLQPDIQRVANGDRSSIFSSHPISEFLTSSGTSAGERKLVPTISEEMDRRQLLYTLLMPVMNLYMPGLDKGKGLYFLFIKAETKTPGGLVACPVLTSYYKSQQFKNRPYDPHNVYTSPNEAILCPDSFLSMYTQMLCGLIMRHEVLRVGAVFASGLLRAIRFLQLNWQQLALDISTGTLNPKITDPSLKDCMAKILKPDPELADFITKECSGGNWEGIITRIWPNTKYLDVIVTGAMSQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPICKPSEVSYTIMPNMGYFEFLPHDDSSSASSTLARDSPPRLVDLADLEVGKYYELVITTYSGLCRYRVGDILQVTGFHNKAPQFRFVRRKNVLLSIDSDKTDEAELQKSIENASVLLKEFKTSVVEYTSFADTKSIPGHYVIYWELLMKDPSNPPTNEVLNRCCLTMEESLNSVYRQGRVADHSIGPLELRVVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVISVHFSPAAPHWTPERRR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0324 601 Pfam GH3 auxin-responsive promoter 26 571 IPR004993 -
Lele49g0324 601 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 591 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0324 Lele-ChrLele49 1911046 1913104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0324 17 589 EF-hand Containing Proteins AT1G23160 47.676 0.0 565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0324 49 1911046 1913104 Lele54g0165 54 1413009 1414972 CCT
Lele49g0324 49 1911046 1913104 Lele55g1319 55 19630028 19631973 CCT
Lele49g0324 49 1911046 1913104 Lele56g1269 56 15993385 15995348 CCT
Lele49g0324 49 1911046 1913104 Lele50g0342 50 1969554 1970735 ECH
Lele49g0324 49 1911046 1913104 Lele49g0324 49 1911046 1913104 ECH
Lele49g0324 49 1911046 1913104 Lele51g0337 51 1924847 1926887 hybridization
Lele49g0324 49 1911046 1913104 Lele52g0349 52 2054672 2056717 hybridization