Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0315 ATGGAAACGGTCCCAAATTTACTGCCGTCGACCCAATTTCAGTCACTTGTATTCTACCAAGGAGCCAAGAGTATTGGATTCTCCAAATCCTTTCTCCACCTGCCCTTCCTCTCTTACTATTCGACTTTTGGCAGCCGCTTTGCTTCTCGCAAACTTCTCAGGCTTCACCGCCGCCCTCTGTCTTGCGTTGCTGAATCCAGCTACGATCACCACCACCACAGCGCTCGAACCCAGCACGATCATCACGGTCACCACCACCATCACGGCGATCAAGCTCACCATGATCATCACGGCTGCCACAACCACCATCACTTACACGGCAACGATTGTGCGAATCTTACCGGACCTCAAAAAGCTATTCTCGGGTTCGCCAAAGCCACCAGATGGATAGACCTGGCGGATTTCTTGAGGGAGCATTTGCATTTATGCTGCTGTTCAACGGCTTTATTTGTGGCTGCTGCCATTTGCCCCCACACCTTGCCTAAGCCCGTCATCAAGCCTGTTCAAAATGCTCTCATTTTCATCGCTTTTCCTTTAGTTGGGGTTCCTGCATCACTTGATGCTCTTGTCGAAATTGGCAGTGGAAAAGTAAATATCCATGTGCTGATGGCTCTGGCAGCCTTTGCGTCCATATTTATGGGAAATTCTTTGGAGGGAGGATTGCTTCTTGCCATGTTTAATCTGGCTCATATAGCTGAGGAGTACTTCACCAGCCGTTCAATGATTGATGTTAAAGAATTGAAGGACAATAATCCAGAATCTGCCCTTGTGCTAGAAACTGACAGTGATGATAAACTTCCTAATACCGTTGACTTGGCGTACAAGAGGGTTCCTGTGCATGATGTAACAGTAGGCTCATATATCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCAAAGGCAGTGCTACAATTACCATTGAGCATCTGACTGGAGAAGTCAAACCTTTGGAGGCTAGAGTTGGAGACAGAGTTCCTGGAGGTGCAAGGAATTTAGATGGGAGAATAATTATAAAGGCAACGAAGGCTTGGAAGGAATCAACTCTTAGCAGAATTGTGCAATTGACTGAAGAAGCACAGTTGAATAGACCAAGGCTTCAAAGGTGGCTGGATGAATTTGGTGAGCAATACAGCAAAGTTGTTGTGGTGTTATCAGTTGCTATTGCTGTAATTGGGCCACTCATATTTAAGTGGCCATTTATTAGTACACCAGCTTGCAGAGGTTCAATTTATAGAGCCCTGGGCCTCATGGTGGCTGCGTCTCCATGTGCCTTGGCTGTAGCTCCATTGGCATACGCTACAGCAATCAGCTCCTGTGCAAAAAAGGGGATATTGCTGAAAGGTGGACATGTTCTGGATGCTCTATCTTCTTGCCGTACAATCGCATTTGACAAAACAGGGACACTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTACGGTCATAAGGTTACAAATAACATAACAAAAATTTCTTCCTGCTGTATTCCTAGCTGTGAACAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCAGTTGTTGACCACAGTGAGGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGACTTGTTGCTACTCTCAACTGCATTGAGTCAGAAACTGGAGGAGCCAAACTTTTAAAAGCATCACTTGGATCTGTGGATTTTATCACCTCGTTATTCCAATCTGAAGACGAGTCTAAAAGGATCAAAGAAGCAGTTAATGCATCTTCTTACGGAAGTGAATTTGTTCATGCTGCCCTTTCAGTTGACAAAAAGGTAACGCTGATTCACTTAGAGGATAGGCCTCGGCCTGGGGTTTCTACTGTCATACGGGAATTGCAAGACGAAGCAGACTTTCGCGTGATGATGTTAACTGGTGACCACGGCTCTAGTGCAAGCAGAGTTGCAACTGCTGTGGGCATCAATGAGGTTTATTGTAACCTTAAGCCTGAAGATAAGTTGAGTCATGTGAAGGACATCTCAAGGGATATGGGGGGAGGCCTAATCATGGTTGGTGAGGGGATTAATGATGCCCCAGCACTTGCTGCTGCAACAGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTCCGGGAAAATATTTCTGCAGTACCGTTTTGTATTGCCAAGTCTCGCCAGACAACTTCACTGATTAAACAAAATGTTGCCCTCGCATTGTCCAGCATTTTCATGGCGTCTCTTCCATCGGTCATGGGATTTTTGCCCTTGTGGTTAACGGTCCTGTTGCATGAAGGTGGAACCCTACTTGTTTGTCTGAATTCCATACGTGGTTTACAGGAACCAGCTTGGTCATGGAAGCATGATGTTCTACATTTGATGAACAGAGTAAAATCTAGACTTCTGTCACTCACGACAAACAACACTACCTCGAGCGCCCTGGACACAGCAAATTTGTGA 2523 0.4594 METVPNLLPSTQFQSLVFYQGAKSIGFSKSFLHLPFLSYYSTFGSRFASRKLLRLHRRPLSCVAESSYDHHHHSARTQHDHHGHHHHHGDQAHHDHHGCHNHHHLHGNDCANLTGPQKAILGFAKATRWIDLADFLREHLHLCCCSTALFVAAAICPHTLPKPVIKPVQNALIFIAFPLVGVPASLDALVEIGSGKVNIHVLMALAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPESALVLETDSDDKLPNTVDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFKGSATITIEHLTGEVKPLEARVGDRVPGGARNLDGRIIIKATKAWKESTLSRIVQLTEEAQLNRPRLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTPACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALSSCRTIAFDKTGTLTTGGLVFKAIEPIYGHKVTNNITKISSCCIPSCEQEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLVATLNCIESETGGAKLLKASLGSVDFITSLFQSEDESKRIKEAVNASSYGSEFVHAALSVDKKVTLIHLEDRPRPGVSTVIRELQDEADFRVMMLTGDHGSSASRVATAVGINEVYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFMASLPSVMGFLPLWLTVLLHEGGTLLVCLNSIRGLQEPAWSWKHDVLHLMNRVKSRLLSLTTNNTTSSALDTANL 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0315 840 SFLD Haloacid Dehalogenase 448 749 - -
Lele49g0315 840 MobiDBLite consensus disorder prediction 73 100 - -
Lele49g0315 840 Gene3D - 238 364 - -
Lele49g0315 840 SUPERFAMILY Calcium ATPase, transmembrane domain M 201 513 IPR023298 -
Lele49g0315 840 Gene3D - 459 747 IPR023214 -
Lele49g0315 840 PRINTS P-type cation-transporting ATPase superfamily signature 642 652 - -
Lele49g0315 840 PRINTS P-type cation-transporting ATPase superfamily signature 696 715 - -
Lele49g0315 840 PRINTS P-type cation-transporting ATPase superfamily signature 619 630 - -
Lele49g0315 840 PRINTS P-type cation-transporting ATPase superfamily signature 466 480 - -
Lele49g0315 840 PRINTS P-type cation-transporting ATPase superfamily signature 720 732 - -
Lele49g0315 840 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 199 798 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele49g0315 840 ProSitePatterns E1-E2 ATPases phosphorylation site. 468 474 IPR018303 -
Lele49g0315 840 SFLD p-type atpase 448 749 IPR044492 -
Lele49g0315 840 Pfam haloacid dehalogenase-like hydrolase 463 709 - -
Lele49g0315 840 MobiDBLite consensus disorder prediction 75 100 - -
Lele49g0315 840 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 601 776 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele49g0315 840 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 272 493 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele49g0315 840 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 67 838 - -
Lele49g0315 840 SUPERFAMILY Calcium ATPase, transduction domain A 274 359 IPR008250 -
Lele49g0315 840 Gene3D - 477 627 IPR023299 GO:0000166
Lele49g0315 840 CDD P-type_ATPase_HM 143 798 - -
Lele49g0315 840 SUPERFAMILY HAD-like 464 796 IPR036412 -
Lele49g0315 840 Pfam E1-E2 ATPase 268 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0315 Lele-ChrLele49 1848202 1855167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0315 116 821 Primary Pumps ATPases AT4G37270 76.771 0.0 1106