Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0314 ATGAATACGGTAGCCGCCAGGAAGGATATGGACCGGATTAAGGGTTCATGGAGTCCGGAAGAGGACGAGGCATTACAGAAGCTCGTCGAGAAGTATGGCCCCAGGAATTGGTCCCTCATCAGCAAGTCTTTTCGCGGTCGATCCGGTAAGTCTTGCAGGCTTCGCTGGTGCAATCAGCTCTCCCCTCAGGTAGAGCACCGAGCGTTCACGCCCGAGGAGGATGAGACCATAATCAGGGCTCATGCCCGTTTCGGTAATAAATGGGCCACCATCGCTCGCCTGCTCTCCGGCCGAACCGATAACGCCATCAAGAACCACTGGAATTCTACGTTGAAGCGCAAGTGTGCATCCATGATGATCGATGACGCCGGCGCTGTCGGTGGATTCGATGGCAGTTTCAGCCCGCGGCCGCTTAAGAGGTCGGTCAGTGCCGGCGCCGCTGTACCCGTGTCCACTGGGCTGTGCATGAACCCGTCCACGCCTGGTAGCCCGTCTGGATCGGATATGAGCGAGTCCAGTGTTCCGGTTGCGTCTTCTTCTCAAGTCTATAGACCAGTCCCGAGAACCGGTGGGGTTCTACCTCCAGTAGAAACGACGTCATCTTCCAATGACCCTCCCACGTCATTATCCCTGTCTCTTCCCGGCGCAGACTCTTCTGAAGTGTCTAATCGGCCTGCAGACCCAACACAAACTGCACCACCGGCCAACAGTAAGCGCTTGTTATCTGTAATGGCGCCGACGCCCGCTCTCCCACTCGCCCCACCTCCGGCTCTGGCACCTGCTCCGATGTCGGTGTTGCCACAGCAGGTTCATTTGGTTAGGGATGATAGAAGTGGCGAGAGGGGTCCAAATCAGAATGGGTTCTTAGGTTTCAATGTCAGTGCAGAGTTGCTAGCAGTGATGCAAGGCATGATAAGGAAGGAGGTGTGGAGTTATATGGCGGGGTTGGAGCAGCAGAATGGGGTGTGCTTTCAGGCAGCTGATGGATTTCTAAACGCTTCGGTGAAGCGTATTGGAATTAGCAGGATCGATTAA 1035 0.5546 MNTVAARKDMDRIKGSWSPEEDEALQKLVEKYGPRNWSLISKSFRGRSGKSCRLRWCNQLSPQVEHRAFTPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDDAGAVGGFDGSFSPRPLKRSVSAGAAVPVSTGLCMNPSTPGSPSGSDMSESSVPVASSSQVYRPVPRTGGVLPPVETTSSSNDPPTSLSLSLPGADSSEVSNRPADPTQTAPPANSKRLLSVMAPTPALPLAPPPALAPAPMSVLPQQVHLVRDDRSGERGPNQNGFLGFNVSAELLAVMQGMIRKEVWSYMAGLEQQNGVCFQAADGFLNASVKRIGISRID 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0314 344 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Lele49g0314 344 CDD SANT 68 111 IPR001005 -
Lele49g0314 344 FunFam MYB transcription factor 14 65 - -
Lele49g0314 344 SMART sant 13 62 IPR001005 -
Lele49g0314 344 SMART sant 65 113 IPR001005 -
Lele49g0314 344 MobiDBLite consensus disorder prediction 153 185 - -
Lele49g0314 344 Gene3D - 67 123 - -
Lele49g0314 344 Pfam Myb-like DNA-binding domain 17 75 - -
Lele49g0314 344 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele49g0314 344 MobiDBLite consensus disorder prediction 194 237 - -
Lele49g0314 344 MobiDBLite consensus disorder prediction 150 237 - -
Lele49g0314 344 PANTHER MYB PROTEIN-RELATED 14 217 - -
Lele49g0314 344 Gene3D - 13 65 - -
Lele49g0314 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Lele49g0314 344 CDD SANT 16 58 IPR001005 -
Lele49g0314 344 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Lele49g0314 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Lele49g0314 344 FunFam Transcription factor MYB44 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0314 Lele-ChrLele49 1844979 1846013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0314 6 320 MYB Transcription Factor Family AT4G37260 51.735 3.51e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele49g0314 Myb_DNA-bind_6 6.5e-18 CL0123