Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0302 ATGGCCACCGACTTTAGTTGCATCCCCATTATCGATATTAGCGCCCTTGTAGCCAAGTCCGATGACCCAAATATTGCTGAGGACCCTGCAGTCTCTGAGGTTGTTAGACAATTGGATCAGGCTTGTAGAGAGGCAGGGTTCTTCTACGTGAAAGGTCACGGTATTCCTGCTACTCTTCTCAAAGAGGTTAAAGAAGTAACACGCATATTCTTTCAACTTCCATACGAAGAAAAGACGGAGATCAAAATGACTGCGGCTACTGGTTTCAGAGGATATCAGAGGGTTGGAGAAAACATAACTAAAGGCGTACCTGATATGCATGAAGCTATAGATTGCTATAGGGAAGTGACAGAGGGCATGTATGGAACGCTCGGCAAACCCATGGAAGGATGCAACCAGTGGCCACAAAATCCCCCAAACTTCAAAGCTCTTATGGAGGAGTATATTAGTCTCTGCACAGAGCTTGCAAGAAAAATTATGAGGGGAATTGCTTTAGCATTAGGTGGATCACCAGATGAATTTGAAGGTCAGAGAGCTGGGGATCCATTTTGGGTCATGAGACTTATTGGTTATCCAGGTGCTTCTATTGCAAATGGAAAAGCTGATCTCAAAAACGACATTGGATGTGGAGCTCACACTGATTATGGTTTGTTGACATTGCTTAATCAGGATGACTATATAAATGCACTCCAGGTGAAGAACCTGTCAGGGGAATGGATATCAGCACCTCCGGTTCCTGGATCATTTGTGTGCAACATCGGCGACATGCTAAAGGTATATTCCAATGGTTTGTACGAGTCAACTCTGCATCGGGTGATAAACAACTCAGAAAGATACAGAGTCAGCGTAGTATATTTCTACGAGACAAACTTCGATACGGCAGTGGAGCCTTTGGATACATTCAAAACGAGAGCGAATGGTTCCAACAAGTTCAAAAGAGCCGTATATGGCGAGCATCTAGTTAGCAAGGTCACCACCAACTTCGTTGATATCTAG 996 0.4418 MATDFSCIPIIDISALVAKSDDPNIAEDPAVSEVVRQLDQACREAGFFYVKGHGIPATLLKEVKEVTRIFFQLPYEEKTEIKMTAATGFRGYQRVGENITKGVPDMHEAIDCYREVTEGMYGTLGKPMEGCNQWPQNPPNFKALMEEYISLCTELARKIMRGIALALGGSPDEFEGQRAGDPFWVMRLIGYPGASIANGKADLKNDIGCGAHTDYGLLTLLNQDDYINALQVKNLSGEWISAPPVPGSFVCNIGDMLKVYSNGLYESTLHRVINNSERYRVSVVYFYETNFDTAVEPLDTFKTRANGSNKFKRAVYGEHLVSKVTTNFVDI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0302 331 Gene3D - 1 329 IPR027443 -
Lele49g0302 331 Pfam 2OG-Fe(II) oxygenase superfamily 205 289 IPR044861 -
Lele49g0302 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 182 289 IPR005123 -
Lele49g0302 331 PRINTS Isopenicillin N synthase signature 212 233 - -
Lele49g0302 331 PRINTS Isopenicillin N synthase signature 38 55 - -
Lele49g0302 331 PRINTS Isopenicillin N synthase signature 158 174 - -
Lele49g0302 331 PRINTS Isopenicillin N synthase signature 277 295 - -
Lele49g0302 331 SUPERFAMILY Clavaminate synthase-like 3 327 - -
Lele49g0302 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 137 IPR026992 -
Lele49g0302 331 FunFam Probable 2-oxoglutarate-dependent dioxygenase At3g49630 3 328 - -
Lele49g0302 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0302 Lele-ChrLele49 1780236 1783428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0302 8 290 Glycosyltransferase AT5G59530 26.117 1.52e-16 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0302 49 1780236 1783428 Lele53g0146 53 1199051 1200025 CCT
Lele49g0302 49 1780236 1783428 Lele54g0147 54 1260298 1261275 CCT
Lele49g0302 49 1780236 1783428 Lele55g1340 55 19834094 19835062 CCT
Lele49g0302 49 1780236 1783428 Lele56g1289 56 16140560 16141534 CCT
Lele49g0302 49 1780236 1783428 Lele50g0317 50 1848224 1851957 ECH
Lele49g0302 49 1780236 1783428 Lele49g0302 49 1780236 1783428 ECH
Lele49g0302 49 1780236 1783428 Lele51g0311 51 1780946 1784053 hybridization
Lele49g0302 49 1780236 1783428 Lele52g0327 52 1927426 1929966 hybridization