Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0300 ATGGTCTTCGTGGAGTCTGTACACTTTGAAATTCTGAGAGAGATGAGAGCAAAAAGGAGATTCCACTCACGAGCTCTCCCCACACTCTCTGTTCTCGCCATGCCTCCTTCCCCCACTCCCTCCCTTGTCCTCGCCCTCCTCTTCTTCTCCCTCCTCTCTTCCTCTTCCACCGCTGCCTCCTCCACCATCGACTTGCTCCTCCCTTCCGACGCCGTTTCCCTCCTTTCCTTCAAATCCCAAGCCGACCGAGACAACAAGCTCCTTTACGCCCTCAACGAGCGCTTTGACTACTGTCAATGGCAGGGCGTCAAATGCTCCCATGGCAGAGTCGTTCGCTTCGTCCTTCAGAACTTTGGCCTCCGTGGCGTCTTCCCTCCCGACACCTTGTCTCATCTCGACCAGCTTCGAGTTCTCAGCCTTCGCAACAACTCCCTTTCTGGTCCCATCCCCGATCTCTCCTCTCTCCTCAATCTCAAATCTCTCTTCCTCGACCATAACTCCTTCTCCGGTTCTTTCCCCCCTTCCATTCTCTTCCTCCATCGCCTTCTCACTCTCTCTCTCTCCCACAACAACCTTACCGGCTCCATCCCCGCCGGATTGTCTCTCCTCGACCGCATGATTTCTCTTCGCCTCGATTCCAACTGGTTTAACGGAACTCTTCCCCCCTTGAACCAGTCCTCGCTCCGAAACTTCAATGTGTCCGGAAACAATTTGACCGGGCCGGTTCCGATGACGCCTACACTCAGTCATCTTCCCCCGGCATCGTTTTCCGGGAACCAGGGTCTCTGCGGCGAGATCATTCACATAGCGTGTAACTCTCGGTCGCCGTTCTTCAGTCCCTCCAATGCCTCCACCTCCGCGGCGCCACTTGGGCAAAGCGCGGAATCGCAGGGAATCGTGGTTGTTCCTTCACATTCATCCACTAAAAAGAAGCATAAGGACACTGCCTTGATTCTAGGATTTACCATTGGATTCTCGGTGCTCATTGCGTCCATCCTGTTCGCAATTGCATTGTTCAGGAAGCGAAACAGTTCCAGAAGACCAGAGAGCCCGAAAATACAAGAGTCATTGGAAACCAAAGATGTAAATGCACCTCCTCCTGCATCTTTAGGCGTCGAGACGGAAATAGAGCAAAATAGGGAATGGGGCGAGAAGGCAAAGAAGATAGAGAAAATAAAAGAAGCACATAAAAGCGGGAATTTGGTGTTCTGCAGTGGGGAGCCGCAGTTGTGTACAATAGAGCAGTTGATGAGAGCTTCGGCGGAGTTGCTGGGTAGGGGTAACATAGGAACAACGTACAAGGCGGTGTTGGATGGTCAGCTCATAATGACAGTGAAGAGGCTGGATGCTGTTAAAACAGCAATAACGAGCAGCCAAGAATTCGAGCATCACATGGAAATGGTGGGGGATCTCCGGCATCCTAATTTGGTGCCCGTTAGAGCTTATTTCCAGGCCAAGGGCGAGAGGCTGGTGATCTATGATTATCAACATAATGGCAGTCTCTTTAACCTCATACATGGTTCGAAATCGACGAGAGCGAAGCCTCTTCACTGGACGTCATGCTTAAAGATAGCTGAAGATGTAGCCCATGGACTCGCCTATATACATCAAGCCTCGAGATTAATCCATGGCAACCTGAAGTCGACTAATGTCCTTTTTGGCGTCGACTTTGAAGCTTGTGTCACAGACCATGGCTTGGCCTTCCTTGCGGATTTTTCATCGACTGAAGACCCTGACTCTGCGGCTTATAAAGCACCAGAGACTCGCAACTCTAGCCGCCGAGCCACTCCCAAGTCCGATGTATATGCCTTTGGGGTGCTTCTATTAGAGCTTCTTACTGGTAAACGTCCTTGTCAACATCCTTTCCTTGTGCCCGCGGATATGCAACATTGGGTTAGAGCAATGAGGGCTGACGATGGTGCTGAACATAATGGGCTCGGTATGCTCACAGAAGTCGCTTGTATTTGCAGTGCAACGTCGCCTGAGCAGAGGCCGGCGATGTGGCAAGTCTTGAAGATGATACAGGAGATAAAGGACAGTGTAACGATGGAGGATACAACAACTGCTAGGGTTTCATAG 2079 0.5123 MVFVESVHFEILREMRAKRRFHSRALPTLSVLAMPPSPTPSLVLALLFFSLLSSSSTAASSTIDLLLPSDAVSLLSFKSQADRDNKLLYALNERFDYCQWQGVKCSHGRVVRFVLQNFGLRGVFPPDTLSHLDQLRVLSLRNNSLSGPIPDLSSLLNLKSLFLDHNSFSGSFPPSILFLHRLLTLSLSHNNLTGSIPAGLSLLDRMISLRLDSNWFNGTLPPLNQSSLRNFNVSGNNLTGPVPMTPTLSHLPPASFSGNQGLCGEIIHIACNSRSPFFSPSNASTSAAPLGQSAESQGIVVVPSHSSTKKKHKDTALILGFTIGFSVLIASILFAIALFRKRNSSRRPESPKIQESLETKDVNAPPPASLGVETEIEQNREWGEKAKKIEKIKEAHKSGNLVFCSGEPQLCTIEQLMRASAELLGRGNIGTTYKAVLDGQLIMTVKRLDAVKTAITSSQEFEHHMEMVGDLRHPNLVPVRAYFQAKGERLVIYDYQHNGSLFNLIHGSKSTRAKPLHWTSCLKIAEDVAHGLAYIHQASRLIHGNLKSTNVLFGVDFEACVTDHGLAFLADFSSTEDPDSAAYKAPETRNSSRRATPKSDVYAFGVLLLELLTGKRPCQHPFLVPADMQHWVRAMRADDGAEHNGLGMLTEVACICSATSPEQRPAMWQVLKMIQEIKDSVTMEDTTTARVS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0300 692 ProSiteProfiles Leucine-rich repeat profile. 134 156 IPR001611 GO:0005515
Lele49g0300 692 Gene3D Phosphorylase Kinase; domain 1 385 495 - -
Lele49g0300 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 48 680 - -
Lele49g0300 692 SUPERFAMILY Protein kinase-like (PK-like) 422 679 IPR011009 -
Lele49g0300 692 SUPERFAMILY L domain-like 70 264 - -
Lele49g0300 692 ProSiteProfiles Protein kinase domain profile. 418 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0300 692 MobiDBLite consensus disorder prediction 345 369 - -
Lele49g0300 692 ProSiteProfiles Leucine-rich repeat profile. 181 203 IPR001611 GO:0005515
Lele49g0300 692 Gene3D Ribonuclease Inhibitor 224 274 IPR032675 -
Lele49g0300 692 Gene3D Ribonuclease Inhibitor 68 223 IPR032675 -
Lele49g0300 692 Gene3D Transferase(Phosphotransferase) domain 1 497 691 - -
Lele49g0300 692 FunFam Probable inactive receptor kinase At5g67200 69 179 - -
Lele49g0300 692 Pfam Protein kinase domain 421 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0300 Lele-ChrLele49 1771972 1775854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0300 52 685 Receptor kinase-like Gene Family AT3G50230 55.183 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele49g0300 Pkinase 1e-29 CL0016