Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0291 ATGAAGGCAACGAAAGAAATAAAGGACATTTCACAGGGTGGAAAGAGAGAGAGAACCCAAGGTGAATTTGAGTCATTGAAAAGAAAAGAGAGGCCAGTGGCTATAGAGAGAGAGCGATGGTGCGCACGAGAAGTGGGAATCAGAAATCTGAGCTCGTCGTTCGATTCCCATCGTCAGGGCCTGTGTTGTTTGGTTGCTTGCTCAGAAGCTGAAGCCTTTAGCCAAAAAAGAATGTGGGATCTGAATGACTCGCCCCATTGTAGAAAGGGTAAGGAATCCGAAGGCTGTTCGTCCTTGAAGCCATCCATGGACGGCGACGAGGACAAAGGGAAAAGGGTCGGATCTATGTCGAATTCAAGCTCATCTGCGGTGGTAATCGAGGACGGATCGGAAGAAGAGGATGGTGAGAGGAGCAAAACATTGAAGAAGAAAAGCAGTAAGATATTCGGGTTCCGTGTGACCCAGGAAGAGTCCATGGATGGTGACCCACCCGTGACCCGGCAGCTTTTCCCGGTGGCGGCGGCGGCGGCCATGTCATCTGGTGGAGGGAGCACGGCCTTACCTAGGGCCCATTGGGTGGGCGTGAGATTCTGTCAGCCAGAAGCAGTCGGCGCCGGTGCCGGGGGCGGAGGAAAATCCGTGGAAGTGTCGTCGCAGCCGATGAAAAAAAGTCGCCGAGGACCAAGGTCGAGGAGCTCTCAGTATAGGGGAGTTACCTTTTACAGAAGAACAGGTCGATGGGAATCCCATATATGGGACTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTCCGGGGAGTGGAGGCCGACATCAACTTCAACATCGAAGACTACGAAGAAGACTTGAAGCAGATGAGCAATTTAACAAAGGAAGAGTTCGTGCACGTACTTCGTCGGCAAAGCACTGGGTTCCCCAGAGGAAGCTCCAAATATAGAGGCGTAACTCTGCATAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTACGTTTATCTCGGTTTGTTTGACACCGAGATTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGTAATGGCAAAGAGGCCGTCACCAACTTCGATCCCAGCATCTACGAGAATGAGCTCAATTCTGAATCGCCAGGTAACACTGCGGATCACAATCTGGATTTAAGTCTGGGCAATGCGAGCTCAAAGCAAGTCAATAATAGTCAAGCACTGGGGAATAATGATGTATCCGAATCAAGTTGGAGGAACAATGGAGGATTAACGAGGCCAACGACGACAGCGCTGGAGGGAGTTCGAGCTCAGGTTCATCAATCTGCAGCATCTAGAGAAATGCACAGATTTGGCGGCGCCAACAGGACTACATCTAGAGAGCCTCATTATCAAATGCTCAACAGTTTTGCTCCATCACATCTTCACCCACCGAGCTTTCATAATTTTCCAAGCAGCAGCAACGAAGGGCGAATAGGGAGTGATCTTTCACTGTCAATGAGCGATCACCATCATCATCAGCAATCGGGGCCTCCTTCTCATCTTCATTACATAGCAACTGCTGCAGCATCATCAGGATTCCCAACGCAGATTAACAGACTTTCCCAAGGATGGCTGCAGAAAAATGGGTTCCACACACTCATGAGACCCAACTGA 1698 0.4976 MKATKEIKDISQGGKRERTQGEFESLKRKERPVAIERERWCAREVGIRNLSSSFDSHRQGLCCLVACSEAEAFSQKRMWDLNDSPHCRKGKESEGCSSLKPSMDGDEDKGKRVGSMSNSSSSAVVIEDGSEEEDGERSKTLKKKSSKIFGFRVTQEESMDGDPPVTRQLFPVAAAAAMSSGGGSTALPRAHWVGVRFCQPEAVGAGAGGGGKSVEVSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESPGNTADHNLDLSLGNASSKQVNNSQALGNNDVSESSWRNNGGLTRPTTTALEGVRAQVHQSAASREMHRFGGANRTTSREPHYQMLNSFAPSHLHPPSFHNFPSSSNEGRIGSDLSLSMSDHHHHQQSGPPSHLHYIATAAASSGFPTQINRLSQGWLQKNGFHTLMRPN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0291 565 SUPERFAMILY DNA-binding domain 233 291 IPR016177 GO:0003677
Lele49g0291 565 MobiDBLite consensus disorder prediction 387 446 - -
Lele49g0291 565 MobiDBLite consensus disorder prediction 204 235 - -
Lele49g0291 565 FunFam AP2-like ethylene-responsive transcription factor 233 292 - -
Lele49g0291 565 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 162 474 - -
Lele49g0291 565 MobiDBLite consensus disorder prediction 83 113 - -
Lele49g0291 565 CDD AP2 234 291 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 SUPERFAMILY DNA-binding domain 325 385 IPR016177 GO:0003677
Lele49g0291 565 MobiDBLite consensus disorder prediction 1 29 - -
Lele49g0291 565 Gene3D AP2/ERF domain 325 384 IPR036955 GO:0003700|GO:0006355
Lele49g0291 565 Gene3D AP2/ERF domain 233 292 IPR036955 GO:0003700|GO:0006355
Lele49g0291 565 SMART rav1_2 326 389 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 SMART rav1_2 234 296 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 MobiDBLite consensus disorder prediction 498 527 - -
Lele49g0291 565 ProSiteProfiles AP2/ERF domain profile. 326 383 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 CDD AP2 325 385 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 MobiDBLite consensus disorder prediction 83 141 - -
Lele49g0291 565 PRINTS Ethylene responsive element binding protein signature 327 338 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 PRINTS Ethylene responsive element binding protein signature 365 385 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 FunFam AP2-like ethylene-responsive transcription factor 325 385 - -
Lele49g0291 565 Pfam AP2 domain 325 374 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 Pfam AP2 domain 234 282 IPR001471 GO:0003700|GO:0006355
Lele49g0291 565 ProSiteProfiles AP2/ERF domain profile. 234 290 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0291 Lele-ChrLele49 1724408 1727484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0291 78 564 AP2-EREBP Transcription Factor Family AT4G36920 56.016 2.50e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele49g0291 AP2 4e-10 CL0081