LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele49g0271	ATGTATCAGAAATTGAGTTGCATATGGTATATTGACAGGAAAACCTTTGCAGCGTCGTTCAAAGACACAACTTTACCCATCTTCACACAAGAAAACGAGAAAGGCTCCCCATGGCTTATGAAATGTTCGGGCGGAGGGCGGATAAACCCTCCTTTTCTTGAGACCTCTATTCCGCTTTCCCGCACATTACTCTTCGCCCCCAGCCGTCGCTGCCACCATTGTCCAACTACAGCCGCCGCGGCGCGGTCAGCGGGATACGACGTAGATGCTAGGTGTGTGAAGATCTCATATCTAACAATAGCGCTTTTCTTTCCAAAATTTTTTACTGGGTGCTTGGTAAAAACATACTTGACCGGTCTCAATCTACAATTCCGGACTATCGTGCTTCTGTTGGTTCTTGTTTCCTCAAGCTTCTATGGATTCTTTTTTGATGTGGTCTTCCTGATTCACCTTCATGGTTCGGCTTCCTGCTTTTGTCATTGTGCCTCTGTTGGTTCCTGCCTTCCTGGTTCGTTGTACTTCTATGGATTCCTGCTTCTATGCGGTAGTCCTTGTTCGTGTTCACCGTTTGCCTTTGTTTCAGCTTTCGTCGTTCTGATGGACTGTCTGGGTTCTTCTAGTTTTTTCTGGGTTTGTCTTGCTTCGCTCTGCTTGTTTGCTTCTCTGTGCTACTTGTGTTTGACCATGATACGGCATGGTTGCCCTACGACCCAATGTTCATCGAGGGTCTGCAGGCCCACACTAGCTTTTAGGCCTGTGTTTTCTTGCAGTTCTCAAATGCCAGCTATGGCTACTGCCTCAAGCATCCAGTGTTCCTCTAATTTAGGGCATAAGTCTTGGTTGCCCAAAGGAATGCCCTCCTCAAACATTTCTGCTGCATCAAGCCTACATTTAACTGGGGATCAAAGTCTTGGTCTTTTGTATCCCAGAATCCCCCTGCCATCTAGGCAAAACAGGTTTTGTATGGTTCCCCAAGCATCAAAGGATGTCCCATATAGTTTCCGTTATCCAGCCATGACAAAAAAGCCCAGATGGTGGTGGAGGACTTTAGCATGCATCCCATACCTTATGCCTCTCCATGAGACATGGATGTATGCTGAGACAGCATATCATCTTCACCCCTTTCTGGAAAACTTTGAATTCATGACATACCCTTTCCTTATGGCAATTGGCAGTTTGCCAGGCTGGTTCCTCATGGCTTACTTTTTTGTCGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCTCACTTCTTCCGGTTCCATGTTGTGATGGGAATGTTATTGGAGATTTCACTTCAGGTGATAGGGACAGTGAGTCGTTGGGTGCCTCTAGCAATCTACTGGGGTAAATTCGGAATGCATTTCTGGACGGCTGTAGCTTTTGCCTTTCTGTTTACAGTGTTGGAGTGTATACGGTGTGCTCTTGCTGGGATGTATGCTGATGTTCCTTTCGTTTGTGATGCCGCATATATCCAAATTCCGTATGATTAA	1494	0.4605	MYQKLSCIWYIDRKTFAASFKDTTLPIFTQENEKGSPWLMKCSGGGRINPPFLETSIPLSRTLLFAPSRRCHHCPTTAAAARSAGYDVDARCVKISYLTIALFFPKFFTGCLVKTYLTGLNLQFRTIVLLLVLVSSSFYGFFFDVVFLIHLHGSASCFCHCASVGSCLPGSLYFYGFLLLCGSPCSCSPFAFVSAFVVLMDCLGSSSFFWVCLASLCLFASLCYLCLTMIRHGCPTTQCSSRVCRPTLAFRPVFSCSSQMPAMATASSIQCSSNLGHKSWLPKGMPSSNISAASSLHLTGDQSLGLLYPRIPLPSRQNRFCMVPQASKDVPYSFRYPAMTKKPRWWWRTLACIPYLMPLHETWMYAETAYHLHPFLENFEFMTYPFLMAIGSLPGWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEISLQVIGTVSRWVPLAIYWGKFGMHFWTAVAFAFLFTVLECIRCALAGMYADVPFVCDAAYIQIPYD	497

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele49g0271	497	Pfam	Chloroplast import apparatus Tic20-like	321	490	IPR005691	-
	Lele49g0271	497	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	256	497	IPR005691	-
	Lele49g0271	497	TIGRFAM	3a0901s05TIC20: chloroplast protein import component, Tic20 family	229	497	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele49g0271	Lele-ChrLele49	1587378	1591369	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele49g0271	240	497	Chloroplast and Mitochondria Gene Families	AT4G03320	35.249	8.91e-48	165