Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0268 ATGTCCTCCCACAGATCGGTGCCGGCGCCGTTTCTGACGAAGACGTACCAGTTGGTGGATGATCCAGGCACCGACGACGTCATATCTTGGGGTGAAAGTGGGAACACGTTCGTGGTGCGGAAGCATGCGGATTTTGCCAAGGATTTGCTTCCCAACTATTTCAAGCACAACAACTTCTCAAGCTTTGTACGCCAGCTCAACACCTATGGATTCCGGAAGATCGTTCCTGACAAATGGGAATTCGCGAACGAATATTTCAAACGAGGACAGAGGGAGCTGTTGGCGGAGATCAAACGTCGGAAACCCGCGGTGCAATCGGCGGCGCAGGCGCCTGCGGCGTCGAACTCCGGCGGGGACGACATGGGATCGACCTCCACTTCGTCACCGGATTCGAAGAATCTGGGAACCGTGGAGACGACGGGTTGTCAAATGGCGAACTTATCGGGGGAGAACGAGAAATTGAGGAAGGATAACGAGATGCTGAGCTGGGAGCTGGCGCAGGAGAAGAAGCAGTGCGAGGAGCTGATAAGTTTCCTGAAGGAGCACGTGAAGATGGGGCCGGATCAGGTCCAACGGATCATGCGGCAAGGAAGTAGTGGGTCCAGCCGCAAACAGGAAGGCGAAGGTGAGGACGAAAACGCTGTAGGTGAAGGGGAGGGGTCTGGTGGGGAAAGCTTGAAGCTGTTTGGGGTTAGGTTGAACACATGCCATGGCACCGCCTCCAACACCAACAGCAAGAGAGGGAGCGAAGACCAAATAGGGTGCGGTGGCCCTCACTCTAATAAACAGCTGAAAACTGTTGACTTTGTTTCACCCGTGATGATGAAGAGCAGCAAGGTATACAGTGAAGACGAGAGGAGCTATTGTCATATCCCGAATGGAAAGAACAGTATAGTGAACGAAGATTATTTCCCCCCTTTTGTAATATGTCGAAAATCAGACCTGGACATCCCCTGCATTTTGGAGCGATTTCGATCGTCGTTGGGAGAAGGGAAAGGTCAAGCAGGGATTCCAGCGTTGAACTTGCCTTACCAAAAAGTCAAAAACGCGTCGTTTATTTTGCCCAGAAGGATACGGCTGCGATCGCTGCTCACCACGGACGGTCCAGATGAACTCAATCGGAAAGTAAAAGAAAACTCGCCCCGTCCTTTTAGGCCTACCTGCTCTTTTAAGAAAACAGCAGGCTCTCCGATTATCATTTGTTTCTGGCTCGCTCTCTTTCTTCGAACTTCGAAGGCTACACCGGTGAAATCTTCTGTCCAGGATGGTAAGTTTTTCCCCGTCTCCTCCTCTGTGTCTCTGGGCCCGTTATATAGAGGAGAATCTACGAGATTTCGTAAACCTAGAGGACGCCATCATGGAATTACCCAACAGAAGAAGCAGGAGATTAGGGAAGCATTTGAATTATTTGACACGGATGGTTCAGGGACCATTGATGCCAAGGAGCTGAATGTTGCCATGAGGGCCCTTGGTTTTGAGATGACAGAAGAGCAAATTAATCAAATGATAGCAGATGTGGACAAGGATGGCAGTGGAGCAATTGACTATGATGAGTTTGAGCATATGATGACAGACAAAATTGGAGAAAGGGACACCAGGGAAGAGCTCATGAAAGCTTTCAAGATTATTGATCAAGATGGAAATGGAAAGATATCTAAAGCAGACATTCAGAACATTGCCAAAGAGCTAGGTGAAAGTTTTACTGCCAGAGACATCCAAGACATGATTGAGGAAGCAGACCTGGATAATGATGGGGAGGTGAATGTAGATGAGTTCATCAGGATGATGAAGAGAACTAGCTATGGTTACTAGGAACAGAATGATGAGAGAGGCCATGGATTAGAGGGATTCAACCAACTGACCGATGTCGATGTGTTTGTTTATATATGTAGAAGAAGGGTGGTGAAGATGTTGAATATATTTATATATATTTGA 1935 0.4837 MSSHRSVPAPFLTKTYQLVDDPGTDDVISWGESGNTFVVRKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGQRELLAEIKRRKPAVQSAAQAPAASNSGGDDMGSTSTSSPDSKNLGTVETTGCQMANLSGENEKLRKDNEMLSWELAQEKKQCEELISFLKEHVKMGPDQVQRIMRQGSSGSSRKQEGEGEDENAVGEGEGSGGESLKLFGVRLNTCHGTASNTNSKRGSEDQIGCGGPHSNKQLKTVDFVSPVMMKSSKVYSEDERSYCHIPNGKNSIVNEDYFPPFVICRKSDLDIPCILERFRSSLGEGKGQAGIPALNLPYQKVKNASFILPRRIRLRSLLTTDGPDELNRKVKENSPRPFRPTCSFKKTAGSPIIICFWLALFLRTSKATPVKSSVQDGKFFPVSSSVSLGPLYRGESTRFRKPRGRHHGITQQKKQEIREAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDYDEFEHMMTDKIGERDTREELMKAFKIIDQDGNGKISKADIQNIAKELGESFTARDIQDMIEEADLDNDGEVNVDEFIRMMKRTSYGYXEQNDERGHGLEGFNQLTDVDVFVYICRRRVVKMLNIFIYI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0268 644 Pfam EF-hand domain pair 461 523 IPR002048 GO:0005509
Lele49g0268 644 Pfam EF-hand domain pair 534 597 IPR002048 GO:0005509
Lele49g0268 644 SUPERFAMILY EF-hand 452 599 IPR011992 -
Lele49g0268 644 ProSiteProfiles EF-hand calcium-binding domain profile. 531 566 IPR002048 GO:0005509
Lele49g0268 644 ProSitePatterns HSF-type DNA-binding domain signature. 50 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0268 644 Gene3D - 3 101 IPR036388 -
Lele49g0268 644 SUPERFAMILY "Winged helix" DNA-binding domain 8 100 IPR036390 -
Lele49g0268 644 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Lele49g0268 644 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 3 215 IPR027725 -
Lele49g0268 644 Pfam HSF-type DNA-binding 11 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0268 644 ProSitePatterns EF-hand calcium-binding domain. 544 556 IPR018247 -
Lele49g0268 644 CDD EFh 535 597 IPR002048 GO:0005509
Lele49g0268 644 MobiDBLite consensus disorder prediction 105 153 - -
Lele49g0268 644 Gene3D - 525 613 - -
Lele49g0268 644 SMART efh_1 535 563 IPR002048 GO:0005509
Lele49g0268 644 SMART efh_1 571 599 IPR002048 GO:0005509
Lele49g0268 644 SMART efh_1 498 526 IPR002048 GO:0005509
Lele49g0268 644 SMART efh_1 462 490 IPR002048 GO:0005509
Lele49g0268 644 SMART hsfneu3 7 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0268 644 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Lele49g0268 644 Gene3D - 437 524 - -
Lele49g0268 644 FunFam Centrin 2 526 602 - -
Lele49g0268 644 MobiDBLite consensus disorder prediction 187 225 - -
Lele49g0268 644 ProSiteProfiles EF-hand calcium-binding domain profile. 494 529 IPR002048 GO:0005509
Lele49g0268 644 Coils Coil 144 171 - -
Lele49g0268 644 FunFam probable calcium-binding protein CML20 438 525 - -
Lele49g0268 644 MobiDBLite consensus disorder prediction 108 147 - -
Lele49g0268 644 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0268 644 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0268 644 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0268 644 MobiDBLite consensus disorder prediction 239 258 - -
Lele49g0268 644 ProSitePatterns EF-hand calcium-binding domain. 580 592 IPR018247 -
Lele49g0268 644 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
Lele49g0268 644 CDD EFh 462 524 IPR002048 GO:0005509
Lele49g0268 644 FunFam Heat stress transcription factor B-4 3 101 - -
Lele49g0268 644 ProSiteProfiles EF-hand calcium-binding domain profile. 567 602 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0268 Lele-ChrLele49 1565544 1572121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0268 434 602 EF-hand Containing Proteins AT3G50360 75.740 2.06e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele49g0268 HSF_DNA-bind 1.2e-31 CL0123