Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0264 ATGGCAGGCAGCGATTCTTGTTTGTATTGTGTTGAGATGGTGGTGGGTCATGGAAAGAACCGAGCGTTAGACGATCGGTCGGCTAAGAAGGAGGTGGTGGACCACCCTCGTGGTTCTACGGCCGCCGGGAAAGCCGTTACTCCGCCGCGCCACGGTAAAAATACGGATGACGATGATGACTTAACCCTGGCCAATTGGTCAAAGTCTCCCATACGCGTTCCTCCTCCAACCATGAACAAACGGAACAAGATGGTACAGAATCAACACAGGCTCATGAACATTCAGAAAAAACATTCGGATTCCATACCTAATCAAGGCTTATCCGATCAGGCACAAACGCCTACAAGCTCCTCTAAGGTGGCAACAGAAAGGACATTATCAGCAGGAGAGGCCAGGTCGGCTGCTGTGTTTCGAGCAGAGATGATCCAATCAAAGTTAGATCCGAGATTCCCTAGCTTTGTCAAGTCATTGCTCAGATCACATGTTGCTGGTTGTTTTTGGATGGGGCTCCCCGCGTTTTTCTGTAAAAGACACTTACCGGATAATGACACTACGATCACTTTGGAAGATGAATCTTGTAAAGAATACCAGTTGAAATACATTGCTTGCAAAACAGGTTTAAGCGCAGGTTGGAGGCAGTTTTCTGCAGTCCACAAATTGCAGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCTTCTAAATTTAAGGTATATATAGTAAGAGCAAATGGCTTAAGCGAACTGGATGGGGCGGCTCCCCTTCAGAATCTGGATGAACATACGAAGCAAAAGGCAGGAGATAATGCAAATAAGTATGCTCACCTGAGTAATAGCCCTAAGAGGAAACAAGAAAAACCTGATTCACCATCTCCAGTCGCCCAAAAGAAAAAGAAGACAAGTGTGTCGAGGTTTTCCCCCAAGGTTAGGCAGTGTGCAGAACAATGTGAATATGAAAGTGATGAAGCTGGTTCAGAAGTACTTGAGAGCCTTGGAACTGAGCTTAAATTCAAGAATGTAAAAAGTTTTGAAAATTTCAGTATCATAATTGACGGAATTCCAATAGATTCCGAGTTCCCCGAGGAGGTTCGAAGCAAGTATTACAAACTCTGTCATAGCCAGCAAGCCTTTCTACACGAGAATCTCATCAAGGGCATCAACTATAACCTCATTGTCGGCATTATATATGAAGTTGTCAACATTTCTGATGCCTTGAAATCCAGCTCACTGCATGTCTCAGCCGCTGAATTTGCTAAATGGGATAAAGAGTTGCTAGCCTTTGAGTGCTTGGGGATGAATATGGAGTTTTTAAGACACCGGTTATGCAGGCTTGTAAACTTGGCATATGAAATACAAGATGCCTCTGAGACTTCAAGGTATACAGCAACGGCGACGTCAACAACTGAATTCAGTCGAGCAGATAACGAAATAATGAATATTGAAACAAAGCTTGTAGAATTGAAAGAAGCTTGTGATGGTTTTGGTGCTTATATTGAGAGTTTGAAGTGCAAAGCTGAGTGCTTCCATCACTAG 1533 0.4384 MAGSDSCLYCVEMVVGHGKNRALDDRSAKKEVVDHPRGSTAAGKAVTPPRHGKNTDDDDDLTLANWSKSPIRVPPPTMNKRNKMVQNQHRLMNIQKKHSDSIPNQGLSDQAQTPTSSSKVATERTLSAGEARSAAVFRAEMIQSKLDPRFPSFVKSLLRSHVAGCFWMGLPAFFCKRHLPDNDTTITLEDESCKEYQLKYIACKTGLSAGWRQFSAVHKLQEGDVLVFQLVEPSKFKVYIVRANGLSELDGAAPLQNLDEHTKQKAGDNANKYAHLSNSPKRKQEKPDSPSPVAQKKKKTSVSRFSPKVRQCAEQCEYESDEAGSEVLESLGTELKFKNVKSFENFSIIIDGIPIDSEFPEEVRSKYYKLCHSQQAFLHENLIKGINYNLIVGIIYEVVNISDALKSSSLHVSAAEFAKWDKELLAFECLGMNMEFLRHRLCRLVNLAYEIQDASETSRYTATATSTTEFSRADNEIMNIETKLVELKEACDGFGAYIESLKCKAECFHH 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0264 510 MobiDBLite consensus disorder prediction 21 80 - -
Lele49g0264 510 Gene3D - 130 245 IPR015300 -
Lele49g0264 510 MobiDBLite consensus disorder prediction 97 124 - -
Lele49g0264 510 CDD B3_DNA 151 242 IPR003340 GO:0003677
Lele49g0264 510 SMART B3_2 153 244 IPR003340 GO:0003677
Lele49g0264 510 MobiDBLite consensus disorder prediction 263 306 - -
Lele49g0264 510 MobiDBLite consensus disorder prediction 97 126 - -
Lele49g0264 510 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 82 245 IPR044837 -
Lele49g0264 510 Coils Coil 470 490 - -
Lele49g0264 510 MobiDBLite consensus disorder prediction 21 37 - -
Lele49g0264 510 MobiDBLite consensus disorder prediction 278 293 - -
Lele49g0264 510 Pfam B3 DNA binding domain 153 243 IPR003340 GO:0003677
Lele49g0264 510 ProSiteProfiles B3 DNA-binding domain profile. 153 244 IPR003340 GO:0003677
Lele49g0264 510 SUPERFAMILY DNA-binding pseudobarrel domain 146 245 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0264 Lele-ChrLele49 1551914 1554804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0264 124 284 B3 DNA Binding Superfamily AT3G19184 40.462 6.05e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele49g0264 B3 6e-15 CL0405