Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0262 ATGGATATGGCTAGGGTGGGTATGATCTCCGGCGCTCGGGCAGCGTTACCTGTGGGAGCCGCAACTTCATCTGCAACGACAAGCAAGAGGAGGAAGCTTAACAGCGCCAAGCATCTCAAATTTTCTGCAGGATCATCCTTCGTCCAGCTTAACAGTAGGAGTCCTGTCATCACTCCACCAGAAACGACGCTAACGCCGCCGGCGGAGTTAGAGGCACGCTGCAGCAGCCTTCACACCGATGAATTCCAGGACTCTTGTTGTTCCAGCAACGGATCCACTGAGCAAGACCAAGAGAGCATCGGTTTCTTAGATGTGGAGGTAGAGAGCGCTCAAGTTGAAACGTCGACGTGTAATTGCAGCGACGACGAGAGGAGAGACTTGAGCCTCACAAGCGAGCTCCGAACCAAGTCAGAAGACATGGAATCGGCCGAGAAACCGAAGGAGAAGCTCATAACGGAGGTGAATTCCCACCGTAAATCCGCGGGGAGAAAGAGGCCAACAGAATTGGAGCTGGAAGAATTCTTCGTTGCCGCCGAGAAAGACATTCAAGAACGGTTTGAGAACAAGTATAATTATGATATTGTGAACGACATGCCTCTGGAAGGACGCTACGAGTGGGTCCTTCCTCCACAACCTGCAAGAGAAAATATAAATGTGGAAGTTGAAGAGGATGATGAGGTGAGGAAGGAGTAA 693 0.5094 MDMARVGMISGARAALPVGAATSSATTSKRRKLNSAKHLKFSAGSSFVQLNSRSPVITPPETTLTPPAELEARCSSLHTDEFQDSCCSSNGSTEQDQESIGFLDVEVESAQVETSTCNCSDDERRDLSLTSELRTKSEDMESAEKPKEKLITEVNSHRKSAGRKRPTELELEEFFVAAEKDIQERFENKYNYDIVNDMPLEGRYEWVLPPQPARENINVEVEEDDEVRKE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0262 230 MobiDBLite consensus disorder prediction 120 147 - -
Lele49g0262 230 Pfam Cyclin-dependent kinase inhibitor 166 207 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lele49g0262 230 Gene3D p27 118 227 IPR044898 -
Lele49g0262 230 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 18 207 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0262 Lele-ChrLele49 1541702 1543917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0262 166 207 Core Cell Cycle Gene Families AT1G49620 69.048 3.43e-15 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0262 49 1541702 1543917 Lele53g0121 53 966956 968144 CCT
Lele49g0262 49 1541702 1543917 Lele54g0120 54 1024300 1025437 CCT
Lele49g0262 49 1541702 1543917 Lele55g1370 55 20065515 20072733 CCT
Lele49g0262 49 1541702 1543917 Lele56g1312 56 16362784 16363915 CCT
Lele49g0262 49 1541702 1543917 Lele50g0272 50 1610832 1612052 ECH
Lele49g0262 49 1541702 1543917 Lele49g0262 49 1541702 1543917 ECH
Lele49g0262 49 1541702 1543917 Lele51g0272 51 1560251 1561504 hybridization
Lele49g0262 49 1541702 1543917 Lele52g0279 52 1664035 1665283 hybridization