Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0251 ATGCGTTGGTTACCTACCCTTTCCCTTTCCCATTCTCGTGGTCCCAAATCCTCCTCTGCGTCTTCTTCTTTTTCCACCTCCGACGTTGACCATCATAAGAAGTCCGCCGATGCCACCCGCGTTTCAGGTGGCGTTTGGCCTTTTGGTACCGGCAAAAAGACTAGCCGCTCCAAGAAGCTCCGACCTATAGCCGACATCGATGGCAAGTCCCCTCCCAAGGGGCATGATTCCTATGATGACGTCATTGTGCCTTTGGTTCATTTCCCGACCCCCTTTGATCTCCAGTTTAGTCGTTCCAATACAACCTCTTCCTTTTCCCCCTCCGTCGCGCCTCAACCCTTGCCCTTGCCGGACTCTGCGCTTTCTCGTCAGAGAGACGCCGATTGCCCTTTACCTTCCCCGAAAGATGTGCCAGGACCCAGCAGCGCCGCCAAAGGGGTGGAGCGCGATCGAGCTGATGGCGTGATGGTCGGCGTCTCCTCTGTTTTCCGAATTCGGAGTGTATTTGCTAGCCCAGTCGTAGGAAAGAATAAGGGGCAGGATGAAACAGGGTCAGCAAGGGCGGTGCGTCAGGATCTAAGTGGTAGGGAAGGTAATCGAGATAACTTCCGCATCAGCGTCTCAACTTGGAGTGCTCCAGTTAGTCCCTTGGTGAGCCCGAACAATGGAAGAAATAGTGATTTCGTTCAATACCAGTATGTGTGTCCCCTGCCAAATCAATATTGGTCGGCACCAGAGATGGTCACATCTGATGCATCATCAGGGACGACTCCTCCTGCATTCTTTGACTTGACTGCATTATCCGCTGATACTTCTCCTCATCACAGTCCACGTGGGAAAAGTCCTAACCAAAATCTCAAAAGCCGAAGTGGAGCTTCCTCACCGGTACGTCCCAGATTATCTCTCAAGACTTCAGTAGCACGTCGTGATTTCAGTGCCCCCTCTCTCTGTGTTCACCCCTTACCATTGCCTCCTGGGGCACCCTTGCTTTCCCCATCTCCTAAATTATCCCCAACTCGGCCCAAATTAGAGTCTTCTTCAATGAAAAGCCAATGGCAGAAAGGGAAACTAATTGGGCGTGGTACTTTTGGAAGTGTTTATGTTGCTACCAATAGAGAAACTGGAGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCTGATGACCCCAAATCCGCCGAGTGTATAAAACAGTTAGAGCAGGTTGTCCATTACTATCTTCTTGTCAATTGTGCAAGTATGAAGCGTATCAATATGCTGTCTTTCTTCACACTGGTAGAGATTAATATTTTCTTGTTATCAGAAATATGGTACTTCATTGAAGAAGAAATCAAAGTTCTTCGCCAGCTGAAACATACAAACATTGTGCAGTATTATGGCAGTGAAATCGTAAGCAATCTCCTTGTTGAAGACCGGTTTTATATTTATCTGGAATACGTTCATCCTGGATCAATAAATAAATATGTCCGAGAACATTGTGGTGCCATAACAGAATCTGTTGTGCGAAATTTTACTCGTCATATTCTTTCAGGCTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTACTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCACCTTACTGGACATGCGGCTGATCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCTGAGCTTATGCTGGCAGTGATGCAAAAAGACAACAGCTCTGATCTAGCTTTAGCTGTTGACATTTGGAGTTTGGGTTGCACAATCATAGAAATGCTCACGGGGAAGCCTCCTTGGAGTGAATACGAAGGAGCTGCGGCTATGTTTAAGGTTATGAACGATACCCCTCCTATACCTGAAACATTGTCACCGGAAGGTAAAGACTTCCTGAGGTGCTGCTTTAAGAGAAATCCAGCAGAGCGGTCAACTGCTTCAGCTTTACTTGTACATCGGTTCTTGAAAAATGCACAACAGCTTGATGTAGTAAATTTGATGGTAAATATAAATACTATAGACAGAAGCTGCAGTGAAACTTTTGACTTAACATTGGTCTCAAGGGATTTTGATGTGGTGACTTTATTGGAATTGTCACTTGCTAATGCTAGTTAA 2127 0.4617 MRWLPTLSLSHSRGPKSSSASSSFSTSDVDHHKKSADATRVSGGVWPFGTGKKTSRSKKLRPIADIDGKSPPKGHDSYDDVIVPLVHFPTPFDLQFSRSNTTSSFSPSVAPQPLPLPDSALSRQRDADCPLPSPKDVPGPSSAAKGVERDRADGVMVGVSSVFRIRSVFASPVVGKNKGQDETGSARAVRQDLSGREGNRDNFRISVSTWSAPVSPLVSPNNGRNSDFVQYQYVCPLPNQYWSAPEMVTSDASSGTTPPAFFDLTALSADTSPHHSPRGKSPNQNLKSRSGASSPVRPRLSLKTSVARRDFSAPSLCVHPLPLPPGAPLLSPSPKLSPTRPKLESSSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQVVHYYLLVNCASMKRINMLSFFTLVEINIFLLSEIWYFIEEEIKVLRQLKHTNIVQYYGSEIVSNLLVEDRFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGVVKLADFGMAKHLTGHAADLSLKGSPYWMAPELMLAVMQKDNSSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMNDTPPIPETLSPEGKDFLRCCFKRNPAERSTASALLVHRFLKNAQQLDVVNLMVNINTIDRSCSETFDLTLVSRDFDVVTLLELSLANAS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0251 708 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Lele49g0251 708 Gene3D Transferase(Phosphotransferase) domain 1 425 687 - -
Lele49g0251 708 MobiDBLite consensus disorder prediction 58 75 - -
Lele49g0251 708 MobiDBLite consensus disorder prediction 99 149 - -
Lele49g0251 708 MobiDBLite consensus disorder prediction 269 301 - -
Lele49g0251 708 Gene3D Phosphorylase Kinase; domain 1 341 424 - -
Lele49g0251 708 MobiDBLite consensus disorder prediction 338 352 - -
Lele49g0251 708 MobiDBLite consensus disorder prediction 328 352 - -
Lele49g0251 708 SUPERFAMILY Protein kinase-like (PK-like) 343 673 IPR011009 -
Lele49g0251 708 MobiDBLite consensus disorder prediction 269 300 - -
Lele49g0251 708 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 17 665 - -
Lele49g0251 708 MobiDBLite consensus disorder prediction 10 26 - -
Lele49g0251 708 SMART serkin_6 352 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0251 708 MobiDBLite consensus disorder prediction 176 200 - -
Lele49g0251 708 Pfam Protein kinase domain 441 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0251 708 ProSiteProfiles Protein kinase domain profile. 352 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0251 708 MobiDBLite consensus disorder prediction 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0251 Lele-ChrLele49 1467069 1471569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0251 1 692 MAP Kinase Kinase Kinase AT5G66850 48.198 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele49g0251 Pkinase 2.9e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0251 49 1467069 1471569 Lele51g0261 51 1493101 1496905 hybridization
Lele49g0251 49 1467069 1471569 Lele52g0269 52 1576715 1581907 hybridization