Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0250 ATGTCCTCATCGAATTCTCCGTGCGCTGCGTGCAAGTGTTTGAGGCGGAAATGCACGCAAGAATGCGTGTTCGCACCGTACTTCCCACCGGACAATCCTCAGAGGTTCGCTTTCGTCCACAGGGTATTCGGGGCAAGTAATGTCGCTAAGCTTCTCAACGAGCTCAACGCCGCGCAGAGAGACGACGCCGTCAAGTCTCTGGCTTACGAAGCCGAGGCCCGTCTCCGGGACCCAGTCTACGGTTGTGTGGGTCTCATCTCCATCCTTCAGCACAGGCTCAGGCAGATCCAAGTGGAACTCAATAATGCCAAGAAGGAACTCGCCACGTATATAGGACCTCAGGCTCTTCAGGCCATGCCTCCCACCATTCTAGCACCTTCCGGAATGATCCCACAACAGCACCCAAGCAATCCATATTCTTCCACCGCCGGTTATCCCTACAACAACATGCCACCGCCTGCGCCTATGACCAATATTCCGACCGGTGACTCCTCTCATAGAGGCCAACTGGTGATTCGTGATCCTTCCCAACAGCATCAGATCTTGGATACCCAGCAGTTGGCCGCCGCCGCGGCTGCGAGAGAGCAACAAGATATGTTTCGAGGTTATGAGCAGCAGCAACAGCAACAAGAGTTGCTGAGATTCAATGGTGGATACGATGTGGGTTCAGTTTCTGGGAGTGGATTCAACAATCATATTTCTTCAACCGCTGCTCCCACCGAGATGTCTCCTTCCTTAGCTCTTGGATCCTTCGACAGCCATTACGGCGGGCAGATGCAACCGCCGCAAGCCGAACACCACCATCAGCTTCGAGCTCAGCTAATGCTTTCCCCACAGCAGCCGCAACCACAACAACAAAGGCAGCAGTCACGGCAATCGCACCAGCAGAAACATTCAGAAAGCGAGGAGGGTAGGAGTGGCATCTGCCTTTCTTGTTGA 939 0.541 MSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFAFVHRVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISILQHRLRQIQVELNNAKKELATYIGPQALQAMPPTILAPSGMIPQQHPSNPYSSTAGYPYNNMPPPAPMTNIPTGDSSHRGQLVIRDPSQQHQILDTQQLAAAAAAREQQDMFRGYEQQQQQQELLRFNGGYDVGSVSGSGFNNHISSTAAPTEMSPSLALGSFDSHYGGQMQPPQAEHHHQLRAQLMLSPQQPQPQQQRQQSRQSHQQKHSESEEGRSGICLSC 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0250 312 MobiDBLite consensus disorder prediction 273 292 - -
Lele49g0250 312 MobiDBLite consensus disorder prediction 235 312 - -
Lele49g0250 312 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lele49g0250 312 Coils Coil 86 106 - -
Lele49g0250 312 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele49g0250 312 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0250 Lele-ChrLele49 1457865 1458803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0250 1 308 AS2 family AT5G66870 50.152 1.45e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele49g0250 LOB 6.9e-41 No_clan