Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0246 ATGGATCCGTCGCCGATGACCTTGGGACCGGCCATGGACATGCCAATCATGCACGATAGCGACCGGTACGATTTCGTCCGAGATATTGGGTCCGGGAATTTCGGGGTGGCCAGGCTGATGAGAGATAAGCAAACCAAGGAGCTTGTCGCCGTGAATTCTGGAGTAGTTATGATAGATGAAAATGTGAAGAGGGAAATCATTAATCACAGGTGTTTGAGACACCCTAATATTGTTAGATTCAAGGAGATTATTTTAACGCCTACTCATCTAGCCATTGTTATGGAATATGCATCTGGAGGAGAACTCTTTGATCGAATCTGCAATGCAGGGCGCTTTCCTGAGGATGAGTTATTGCCATGCGATGTATGTCATCGGGACCTGAAGCTGGAAAACACATTATTAGATGGAAGCCCAGCACCTCGTTTGAAGATATGTGATTTTGGTTACTCCAAGTCATCAGTGCTTCATTCACAACCGAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGCTGAGGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCTTGTGGAGTGACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGAGCCAAAGGATTTTCGAAAGACTATACAGAGAATTTTGAGCGTCCAGTATTTCATTCCAGACTTCGTCCAAATATCCTCTGAGTGCCGTGACCTTATCTCTAGGATATTTGCTTTTGATCCTGCAGAGAGAATCACCATTCCTGAAATCTTGAACCATGAATGGTTTTTGAAGAATCTCCCCGCAGACCTAATGGATGAGAAGATACTGGGTAACCGATTTGAAGAATCAGACCAACCAATGCAGAGCATGGACGTGATCATGCAGATAATTTCAGAAGCTACTATACCACCACCTGGGACCTGTTTTTTGGATCAGTTTATGGCAGACTTTGACGGAGACTATGGCATGGATGAATTAGAGTCGGACTCTGAGCTTGATATTGACAGTAGTGGGGAGATAGTTTATGCCATTTGA 1038 0.4403 MDPSPMTLGPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTKELVAVNSGVVMIDENVKREIINHRCLRHPNIVRFKEIILTPTHLAIVMEYASGGELFDRICNAGRFPEDELLPCDVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRILSVQYFIPDFVQISSECRDLISRIFAFDPAERITIPEILNHEWFLKNLPADLMDEKILGNRFEESDQPMQSMDVIMQIISEATIPPPGTCFLDQFMADFDGDYGMDELESDSELDIDSSGEIVYAI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0246 345 PANTHER SERINE/THREONINE KINASE 22 276 - -
Lele49g0246 345 FunFam Serine/threonine-protein kinase SRK2A 97 271 - -
Lele49g0246 345 SMART serkin_6 23 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0246 345 Gene3D Transferase(Phosphotransferase) domain 1 97 271 - -
Lele49g0246 345 ProSiteProfiles Protein kinase domain profile. 23 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0246 345 SUPERFAMILY Protein kinase-like (PK-like) 14 305 IPR011009 -
Lele49g0246 345 Pfam Protein kinase domain 23 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0246 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Lele49g0246 345 Gene3D Phosphorylase Kinase; domain 1 4 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0246 Lele-ChrLele49 1425626 1429368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0246 16 273 CBL-interacting serine-threonine protein kinases AT4G24400 38.028 1.97e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele49g0246 Pkinase 2.6e-52 CL0016