Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0243 ATGCTCCATTTCTGGCGCCAACAACGGAAAAAGCTCGTTTGGCTCAAGTTTGATTCCTCTCGCAGAATTAAAAAAGATCCTTCAAGATCTTATTTGCTATTGATTGAGCGAACAGGAGAGAAATTAGCCATGGCAGTGGCAGAGGCTGCAAAACTAATTGACGGAGCTGATCTAGCACTGGTGCTTCAAGAGTCGTTGAAGAAGATAATGGAGATCATCAATAGAGCTCACAAAAGAGCATCCACACTCCAAATATTGAGGTCAACTCTGAAGGATTCCACGTCGTTAGTGGAAGACATCAAAAAATTTAATGATCACTTAGATCAGCCCAGAAAAGAAATAGAAAAGCTTGTCCAGGAAAGGGAAGCGGGAGATGAGCTCCTAAGCAAGTCCCCGAAAATCCCTTTCTGGAAATTCCCTTTCCTAAAATTCCCATTTGCAAAATACTATGATGGCGAACCTGGAGAAAGGCAGGGTTCAATCTTCAAGTGCCTGTCCTTTAATTCGAGAGGTGAAGATAAGATGGTAAGGGATGTGAAGGAGACTCTGAAGCAGGTGAGAGAAGTTCTGGAAACTATGAGCAAAGAAAATTCTGAGCACGGAATTACGTGTTCGCGTCCTCAGAACCCAGAATTCGTTATCGGCATGGAGGAGCCTTTGTTGAGGTTGAAGATGGAGCTCCTCAAGGATGGTGCAGCCATTCTTGGGTTGACGGGTCTACCAGGATCCGGAAAGACCACGTTGGCTAGACGGGTATGCGGGGATGAACAAGTCAAAGGTAAATTCAGGGACCATATCTTGTTTGTGACCTTATCAAAAACACCCAACTTCAAGGTCATTGTGGAGGCGCTATTTCAACGTTGTGGGAAGGTTCCCGAGTTTCATAGCGACGAAGAAGCGGCTAAAGAATTGGGATTTCTGTTGAGTAAAATATCTGGAAGTCCAATATTGCTAGTGCTGGATGACGTTTGGCCCGGCTCAGAATCCCTTGTTCAGAACTTCAAGTTCCTGATTCCCAATTATAAGATTTTGATCACTTCAAGAGTAGCGTTTCCAACAATTAACCGTCAAATCCAATTGGAACCACTTCGTTATGAAGATGCACTAACACTTTTCCGTCACTTTGCTCTTGTAAAAGACAATTGCTCGTATATTCCCGAAGAATTACTTGTACAACAGGTTGTGAAAACTTGTAAGGGCCTACCTTTGGCCATTAAAGTAATCGCTAGATCACTGTGTCAGCAGCCTCATGAGACCTGGCTAAAGATGGTGAAGGAATGGTCGCAAGGTCATTCTATTCTTGATTCCAATTCAAATTTGCTTAAGTTCCTCCAAGGAAGCTTGTGTCTTTTGGAAGATGAGCCCATTATCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCTGAAGACCAAAGAATTCCTGCTACGGCTCTCATTGATATGTGGGCCGAACTGTATAAACTTGACGATGACGGCAAAGAAGCAATGGCCATAATCAATAAATTAGTCTCCCTGAATTTGGCAAATCTCCTTGTTACAAGGAAAGTTGAAAGTGATACGGACAGTTACTACGCCAACCACTTCATCATGCAGCATGACCTTCTAAGAGAGCTTGCAATTCATCAAAGCAACCAAGAACCATTAGAATGGAGAAGAAGATTGATGGTTGACATAAATGAAAATAATCGCCAATGGTGTCTAGAGGAGCAGCGAGGCATTATTGCCCTCATGTCATCAATATTCCTTAAATGGTGCGTTAAACAAAAGCAGCAACCTGCCATTGCGCGGACATTGTCTATATCAACTGATGAAGCACTCACTTCAGATTGGGGCAAAACACAATTAGCTGACACTGAGGTTCTAATATTGAATGTTCGTACTAAGCATTATTCCTTGCCAAAGTTGATGGAGAAAATGAATAGTCTAAAGGTTCTAATATGCACTAATTATGGTTATCATACTTCCGGATTGGAAAACTTTGAGCTACTTGATTCTTTATCTACCCTGAAAAGAATTAGGCTGGAGAAGGTTTCTTTCCCTTCCCTTGGCAAATTGAAGAACCTGCAAAAATTATCCCTTTATATGTGTGATACAAGTCAAGCTTTTGGAAGCTGTAAGATACCAATGTCAGATGCATTGCCGATTCTAGTAGAATTGAACATTGACTATTGCAAAGATATGATGGAATTGCCTTCCAGTATCTGTGATATTAAAACTCTCAGAAAGCTTAGTATTTCTAACTGCCACAAGTTTTCCACTTTGCCCCAAGAAATAGGAAGGCTGGAGAATTTGGAACTACTGAAGCTTAATTCCTGTACTGATTTAGGAGTTATACCAGAATCAATTGGTTGGCTTTCCAGGCTACGTTTTCTTGACATATCAAACTGCCTAAGCCTAGGAAATTTACCAGAGAGCATTGGTAATTTGCAAAACATAGAGAAGTTGTACATGACAGGTTGCTCAAGGTGTGAATTGCCAGGCACGGTCATGAATCTTGAGCATTTAAAAAGTGTAACGTGTGATGAGGAGACGGCTGCTTCGTGGGAGGTTTTCAAGCCAGAGCTTTCCGATCTAAAGATTGAGGTGCCACATGTAGAAGTTAACTTAAATTGGCTTCTTGGGACAAGCTCCTAA 2634 0.418 MLHFWRQQRKKLVWLKFDSSRRIKKDPSRSYLLLIERTGEKLAMAVAEAAKLIDGADLALVLQESLKKIMEIINRAHKRASTLQILRSTLKDSTSLVEDIKKFNDHLDQPRKEIEKLVQEREAGDELLSKSPKIPFWKFPFLKFPFAKYYDGEPGERQGSIFKCLSFNSRGEDKMVRDVKETLKQVREVLETMSKENSEHGITCSRPQNPEFVIGMEEPLLRLKMELLKDGAAILGLTGLPGSGKTTLARRVCGDEQVKGKFRDHILFVTLSKTPNFKVIVEALFQRCGKVPEFHSDEEAAKELGFLLSKISGSPILLVLDDVWPGSESLVQNFKFLIPNYKILITSRVAFPTINRQIQLEPLRYEDALTLFRHFALVKDNCSYIPEELLVQQVVKTCKGLPLAIKVIARSLCQQPHETWLKMVKEWSQGHSILDSNSNLLKFLQGSLCLLEDEPIIKECFMDLGLFPEDQRIPATALIDMWAELYKLDDDGKEAMAIINKLVSLNLANLLVTRKVESDTDSYYANHFIMQHDLLRELAIHQSNQEPLEWRRRLMVDINENNRQWCLEEQRGIIALMSSIFLKWCVKQKQQPAIARTLSISTDEALTSDWGKTQLADTEVLILNVRTKHYSLPKLMEKMNSLKVLICTNYGYHTSGLENFELLDSLSTLKRIRLEKVSFPSLGKLKNLQKLSLYMCDTSQAFGSCKIPMSDALPILVELNIDYCKDMMELPSSICDIKTLRKLSISNCHKFSTLPQEIGRLENLELLKLNSCTDLGVIPESIGWLSRLRFLDISNCLSLGNLPESIGNLQNIEKLYMTGCSRCELPGTVMNLEHLKSVTCDEETAASWEVFKPELSDLKIEVPHVEVNLNWLLGTSS 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0243 877 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 49 872 IPR039203 GO:0050832
Lele49g0243 877 Gene3D - 363 443 IPR042197 -
Lele49g0243 877 Gene3D - 173 355 IPR027417 -
Lele49g0243 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 464 IPR027417 -
Lele49g0243 877 Gene3D Ribonuclease Inhibitor 583 855 IPR032675 -
Lele49g0243 877 PRINTS Disease resistance protein signature 398 412 - -
Lele49g0243 877 PRINTS Disease resistance protein signature 783 799 - -
Lele49g0243 877 PRINTS Disease resistance protein signature 310 324 - -
Lele49g0243 877 PRINTS Disease resistance protein signature 234 249 - -
Lele49g0243 877 Coils Coil 176 196 - -
Lele49g0243 877 Gene3D - 444 540 IPR036388 -
Lele49g0243 877 Pfam NB-ARC domain 220 427 IPR002182 GO:0043531
Lele49g0243 877 SUPERFAMILY L domain-like 620 838 - -
Lele49g0243 877 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 51 138 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0243 Lele-ChrLele49 1412918 1417514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0243 214 835 WRKY Transcription Factor Family AT5G45050 23.556 8.12e-13 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0243 49 1412918 1417514 Lele51g0254 51 1433457 1442751 hybridization
Lele49g0243 49 1412918 1417514 Lele52g0262 52 1527798 1529258 hybridization