Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0238 ATGAGTTTGATTCCCAAGATCATAAAGAAGATGATCCAGGAACTGTTGAGGGGTGCTGGGCTCATTGCAGGCGAAAGGAAAATCTCCACTAGCGGAGCAGCCGCAGTCTTGTCGCTCACCAATACGTCTCATACTTCTGTTCCTTCTTCTTCTTCATCTCATCACCCTTCAACCCCCATCACTACTTCTACCACCACCGCCGCTGCAGCTGCAGCCACATCCACAAATTCCGAGAACCAAAATCTGAGGTGCCCGCGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGTTCTCTCAGGAATGTTCCAATCGGCGGTGGTTGCCGGAAGAACAGGAACGTCGGCGCCTCCAACTCCGTTGTGAAGACAACCGTGGCTAAGATGAAAACAGCTGCACCATCGGAGCTTGAAAGGTCGGTGCTCGGGGTGGCCGGGTTCATCGACCACGACCTTTCTTCAAACCCGATTCTATGGGGCTCGCCGCAAAATTCTCACGTGTTAGCTCTACTGAGAACTGGTCAAAACCATAACCCTAACCCTAACCCTAGTCTTCCCATGTCCGTCAATGCTGTTAAGGAAGGAGGGAACTTGATGGTGTCCCACTCGGTGACTGAGCCAGTGGTTGGAAATGGGTTGGTTAATGGTCGAGCCCTAAACTTCGATTCTGTTGGTCAATTTCCCACAATTGGGCACCGCAGCTCTGTCTGGAGAAGCAGTAATAGTAATAACAATAATGAAGATGGGTTCTTAGCTGGAGAACATGAGGGCAGTGGAATTCAAGAACAGTACCAGAGGCTGAGATCATCAACATCAGCAGCTAATTTTTATTGCAGCAACAATAATAACTCATCACAGGTCTTGGGGAACATGGCTTCTTCTTCACACGCATCGTCTCCTTTATCAGCTAATTTGGGGTCAGCTCCAGTAGTCGCTGGGGATGATCAATTGGGGTTCACCTGGAATCCAACTCTTTCGTGGTTTGATCTTTCCACCACCAATGGTACTTTATATCCTTAA 1086 0.4899 MSLIPKIIKKMIQELLRGAGLIAGERKISTSGAAAVLSLTNTSHTSVPSSSSSHHPSTPITTSTTTAAAAAATSTNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGSLRNVPIGGGCRKNRNVGASNSVVKTTVAKMKTAAPSELERSVLGVAGFIDHDLSSNPILWGSPQNSHVLALLRTGQNHNPNPNPSLPMSVNAVKEGGNLMVSHSVTEPVVGNGLVNGRALNFDSVGQFPTIGHRSSVWRSSNSNNNNEDGFLAGEHEGSGIQEQYQRLRSSTSAANFYCSNNNNSSQVLGNMASSSHASSPLSANLGSAPVVAGDDQLGFTWNPTLSWFDLSTTNGTLYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0238 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 68 283 IPR045174 GO:0003700|GO:0006355
Lele49g0238 361 MobiDBLite consensus disorder prediction 43 82 - -
Lele49g0238 361 ProSitePatterns Zinc finger Dof-type signature. 84 120 IPR003851 GO:0003677|GO:0006355
Lele49g0238 361 ProSiteProfiles Zinc finger Dof-type profile. 82 136 IPR003851 GO:0003677|GO:0006355
Lele49g0238 361 Pfam Dof domain, zinc finger 80 136 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0238 Lele-ChrLele49 1394123 1395586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0238 42 146 C2C2-Dof Transcription Factor Family AT5G65590 55.238 2.70e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele49g0238 zf-Dof 1.2e-31 No_clan