Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0230 ATGTGTAGCAGGAAGGCCATGGCGTGGATGAAATTTGATTACAAGATTGTGATTGTGTTTCTAGTTTTAGCTGTGAATGTGAGCTATCGTGGAGATGCGGCCAAGAATGGGAGTTTAGGAGCTTCATTCATATTTGGGGACTCCTTGGTGGACGCTGGAAACAACAACTATCTATCAACTCTGTCAAGGGCAAACATGACACCCAATGGAATTGATTTTAAGGCCTCCGGTGGAAACCCCACCGGCCGCTTCACCAACGGACGAACCATTGCTGATATTGTTGGAGAGAAACTGGGGCAACCAAATTATGCTGTGCCGTTCTTGGCTCCAAATGCAACTGGCAAAGCTATACTATACGGAGTGAACTACGCTTCTGGAGGAGGAGGCATTCTCAATGATACAGGAAGAATATTTGTGAATAGGCTGGGAATGGATGTTCAGGTAGACTACTTTACCCTAACAAGGAAAGAGATAGATAAGTTGCTGGGAAAATCAAGGGCAAGGGAGTTCATAATGAAGGAATCCTTGTTCTCCATCACAGTGGGATCGAATGATTTTCTCAACAATTATCTTCTCCCACTCGTCTCCATTAGAGAAAGAATTTCTGAAAGCCCAGATGCTTTCGTCGACGATATGATTAATCACTTCAGAACCCAACTCACGAAACTTTACCGGCTGGATGCTCGGAGATTTGTGGTGGCGAACGTTGGTCCGATAGGGTGCATACCTTACCAGAAGACCATAAATCGGCTGGATGAAAATGAGTGCACGGATTTGGCAAACAAGCTTGCAGTTGAATATAATGGTCGATTAAAGGATTTGCTTGCCGAACTAAATGACAACCTCCCCGGAGCCACGTTCGTGCTTGCCAACGTGTACGATCTCGTGATGGAACTCATCACAAATTATGCCAAACACGGATTTAGAACAGCAAGTGTAGCATGCTGTGGAAATGGAGGGCAGTACGCAGGGATAATTCCATGTGGGCCGACGTCAAGCTTGTGCACGGACAGGTACAGGCATGTGTTCTGGGATCCATACCATCCGAGTGAAGCTGCCAACGAAATACTCGCAGATCAGCTGGTTGACGGAGACACCAGATTCATTTCTCCCATGAATCTTCGCCAGCTTCGAGACCTTTAGGAGCGTATATTGGGTTATAGGGATGAGAGCCAGAGACTGGATCAGTGTGGTCGTCTCTATGATTCTTCAATTTCAAACGAAGGGTTTGAGCTTGATGCAAGCCGCATTGTTCAGGAACTTGGGGGAATCAGCACTGCCATGGAACGACAGAAAACTTTGTTGCAGGAATTGATGTTTGTCGTTAAGGATATGTTACGCAACACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCGAGGTTCCTTCATCCTAGTGGAGGGGGTGCTTCAAGTGCCATATCCCCTTTGCAGACTCCTGGAACCACTATAACTCCTAGTTCAAGTAACCAGCCAACAACTAAAACGATAGTGCCTGTTTTTGATTTTTATTATGGGCTTCCAAAGAAACCGTCGCCCTTTTTACAGCAATCAGTCTTAAGATTTGAGAAGTATCTGGGTGAATGCCGACAATGTATTGAAGAGTTGGAGCAGCTGCTTCTTTTAGACTCTGAGAAAAACAGTTCAAATAACAGATCCTCATTATTGCAATCTCTTCCTAAAGTTATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGTAAAGATAGACTAA 1746 0.4473 MCSRKAMAWMKFDYKIVIVFLVLAVNVSYRGDAAKNGSLGASFIFGDSLVDAGNNNYLSTLSRANMTPNGIDFKASGGNPTGRFTNGRTIADIVGEKLGQPNYAVPFLAPNATGKAILYGVNYASGGGGILNDTGRIFVNRLGMDVQVDYFTLTRKEIDKLLGKSRAREFIMKESLFSITVGSNDFLNNYLLPLVSIRERISESPDAFVDDMINHFRTQLTKLYRLDARRFVVANVGPIGCIPYQKTINRLDENECTDLANKLAVEYNGRLKDLLAELNDNLPGATFVLANVYDLVMELITNYAKHGFRTASVACCGNGGQYAGIIPCGPTSSLCTDRYRHVFWDPYHPSEAANEILADQLVDGDTRFISPMNLRQLRDLXERILGYRDESQRLDQCGRLYDSSISNEGFELDASRIVQELGGISTAMERQKTLLQELMFVVKDMLRNTEVAIRSFMMLRPRFLHPSGGGASSAISPLQTPGTTITPSSSNQPTTKTIVPVFDFYYGLPKKPSPFLQQSVLRFEKYLGECRQCIEELEQLLLLDSEKNSSNNRSSLLQSLPKVMTNVHDFFVHVAAKVKID 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0230 581 MobiDBLite consensus disorder prediction 470 492 - -
Lele49g0230 581 CDD SGNH_plant_lipase_like 41 365 IPR035669 -
Lele49g0230 581 Pfam GDSL-like Lipase/Acylhydrolase 43 360 IPR001087 GO:0016788
Lele49g0230 581 SUPERFAMILY SGNH hydrolase 45 362 - -
Lele49g0230 581 Gene3D - 511 580 - -
Lele49g0230 581 MobiDBLite consensus disorder prediction 472 492 - -
Lele49g0230 581 Gene3D SGNH hydrolase 29 364 IPR036514 -
Lele49g0230 581 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 41 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0230 Lele-ChrLele49 1360214 1365108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0230 369 579 NAC Transcription Factor Family AT4G37130 64.486 9.60e-83 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele53g0101 53 744333 746138 CCT
Lele49g0230 49 1360214 1365108 Lele54g0102 54 813284 814924 CCT
Lele49g0230 49 1360214 1365108 Lele55g1394 55 20302862 20304691 CCT
Lele49g0230 49 1360214 1365108 Lele56g1330 56 16560531 16562184 CCT
Lele49g0230 49 1360214 1365108 Lele51g0244 51 1384964 1386504 hybridization
Lele49g0230 49 1360214 1365108 Lele52g0245 52 1452905 1454677 hybridization