Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0226 ATGAAACAGAGCCATCTGCATTTGCCAACCACAACTGCTGTATACACATTGCATAAGTTGAACAGATCCAACATTACATCTCATCGCTTACATTTGCAAGATCAGAGGTTACGCTTAGAAATGGGGCAAACTGGAGAAAGATGCAGAGCGTTGGAAAGACATATATATTGGACAGAATTCGCTCCCAACAGGCACCAATTTTTCAAGCTAATGATGGGTGATTTCAGGAACCAGCTGGTTTCAGAAGCTACAGGTATTGATGGATTCTCATCTCTTTTACAGCGAATTCCAAGAAAATTCGTTAGTCATTTTAAGGAGGAACTGCTGGGTACTGTAAGACTTATAGGGCCGAGTAGAAATGTGTGGAATGTGACCATTGCAAGAACGGATGACGACATCATTTTTCAGATTGGTTGGGGAAAATTCGTGCAGGATCACAGTTTAGCCGAAAGAGATTTTCTTGTCTTCCACTACATTGGATACTCTTCTTTCAATGTCTCCATTTTTGATGAAACAGGATGTGAAAGAGAAGGTGCTTTTTTCGTCAAGAAACACATTTCGTGCAATAGAAATGCTTGCTTTCTTCAAAATGAAGAGGAAAACATCCTGCAAATTACTGGTGTGGAAGAAATGAAAGGAAGAGATTGCGCGAGCGGAGAGGTGCGAGAAAGAAACCTGAAAAGCAAAACTTGTATGCTAGTTGGAACCGGGTTTGAGGCCAAAAATTCAGACATGGAAACTTTTGGTGCTGGGAAAGAAGACATCCGGCCAAAAAGAGAAGTTGTTTATCCAGATGAACTTGATTGCCAACTCGTAAAAAGCAAAAACAAACGCCCGTTGTCTCGGACGCCATTGAGGCATAAACCTAAAACCCCTCCCCTGGTCCTGAAACACCGAGAAGGACCGCCAAATATGCGCGCGTTATTCCGATTTGGTAGCATCAGTAGACAGTGCCGCCGTCGCAACTGCCACCTTCGCCACTATAAGGCGCCAAAGCCAGCGACTCCACCGTCACCACCGACGCCTCCAAAGCCTCCAAAAAAGCCTCAGAAATTTGAGTTCCATGGGATTGCGTGGGAGGACCCGCACAGCTGGATGTCTAATCTTAATGACAAGGTAGCCATGCGCCATATGGACGTTTACATGGAGCAGGAGGAGAAATACACGGAGGCAATCATGTCTGAGACTGAGCGACTTCAGAGTAAGCTCCAATCAGAGATGGCCGCCCGGATGGCCTTTGAACTTTCTACTCCTCCACTTCGCTGGGGCCCTTGGTTGTATTATCGACGTGCTGAAGAGGGAAAGCAGTACCCTGTACTGTGCAGAAGGTTGGCGAGCTTGAACGAGGAGTTCATATCAAATAAATCTCCTTCAGCAGGATTCGATTTTGCATCAGGGAAGAGAATTGAGCAGAAGCTCCTTGACTACAATCAAGAAGCCGAGAGATTTGGCGGTTATGCTTATGAAGAATTGTCGGAAATTTCACCAAACCATCAGTTTATTGCATACACTATGTATGATAAAGACAACGACTGCTTTAAGCTATCTGTGAGAAATTTAAATTCTGGTTCATTATGTAGCAAGCCTCAGGCTGATCGGGTTTCGAATCTGGCATGGGCAAAAGATGGGCAGGCGTTGCTTTATGTTGTAACAGATCACAGGAAGAGACCCTACCGGATCTACTGCAGTATGATTGGATCAACTGATGAGGATTTTTTGCTTCTGGAAGAATCTGATGAAGGCGTTCACATTAATATAAGGCACACAAAAGATTTCCGTTTTGTGACTGCAAATACATTCTCTATAATGTCTTCGAAGGTCTTTCTGATAAATGCAGCTGATCCATTGTCGGGCATGACATTAGTTTGGGAGTGCGATGCTCAAGCTCACTGCATAATAGAGCATCATCAAGGTTTCCTTTATTTATTTACAGATTCTCCAAAAGGGGGCAAATCAGCCGATAGTCATTATCTTCTTCGTAGTGCAGTGAATGATTTTTCAAATCCAAGAAAATGGGAGGAAGTATTTGTTGATGACCAAAATTTGACTGTGGAGGATGTTGATTTTTGTGATAAATACTTAGTACTCATTACAAGGGAAGGGCGAAAGTTTCAGCTTTGTTCTGTAAGCCTGCCACTTCCCTTTGGGAAGGGGGCTGTTAAACTGAGGGAGCTGGACCTACAGTATCTGTCTCTTCCAAAACATGTTTGTCAAATTTCACCTGGACCTAATTATGACTACTTTTCATCAGTCATGCGCTTTATAATATCATCACCTGTGATGCCTGATGCCGTGGTTGATTATGACCTGACAACTGGTTGTTGGAACATCATTCAACAGCAAAATCTGCTTCAGGAAAGAACACGGATACTATATGGTATGAGTTCTGCAAGCAAGAACCAGGACTTATCATACTCTAAATGTTCCAATTCTTTGAATGCCAATGTTCAAGATGACCTCTTATGGAATAGTCTCTCTGAGTTCTATGCTTGTGAACAATATGACGTTCCTTCATTTGATGGGGTCATGGTTCCTTTGACTGTTGTTTTTGCTCGTGACAATAAGAACAAGGATAAAGGGCCTGGGTTACTGCATGGACATGGAGCTTATGGCGAGTTGCTTGATAAACGGTGGCATGGTGAATTGAAAAGCCTCTTGGATCGTGGTTGGGTCATTTCTTATGCTGATGTTAGAGGTGGTGGTGGTTTTGGTAAGAAATGGCATCATGATGGCAGACGTACAAAGAAACATAATTCGATCAATGATTATATCTCTTGTGCCAAGTTCCTGATTGAAAGAGATATTGTGGATGAAGGTAAACTGGCAGGTTGGGGATATAGTGCTGGAGGCCTTGTGGTTGCTTCAGCCATCAACCATTGCCCAGATTTATTTCGTGCTGCAATCTTGAAGGTACCATTTTTAGATGCTACCAACACTCTTCTGTATCCTATCTTACCACTTCTGCCAGTTGACTATGAAGAGTTTGGCTACCCTGGGGACCTTGATGATTTTCTTGCTATTCGGGATTATTCTCCTTATGACAATATTCAGAAGGATGTTCTTTATCCTGCTGTATTAGTGACCTCATCTTTCAACACACGATTCGGGGTATGGGAAGCAGCAAAATGGGTTGCACGAGTCCGTGATCTTGCCATTTATGACCCAAGAAGACCAATACTGTTAAATTTGACCGCAGATATAGTAGAGGAAAACCGTTATCTGCAGAGCAAGGAGTCAGCATTAGAAGCTGCGTTTCTAATTAAGATGATGGAATCTTAG 3279 0.43 MKQSHLHLPTTTAVYTLHKLNRSNITSHRLHLQDQRLRLEMGQTGERCRALERHIYWTEFAPNRHQFFKLMMGDFRNQLVSEATGIDGFSSLLQRIPRKFVSHFKEELLGTVRLIGPSRNVWNVTIARTDDDIIFQIGWGKFVQDHSLAERDFLVFHYIGYSSFNVSIFDETGCEREGAFFVKKHISCNRNACFLQNEEENILQITGVEEMKGRDCASGEVRERNLKSKTCMLVGTGFEAKNSDMETFGAGKEDIRPKREVVYPDELDCQLVKSKNKRPLSRTPLRHKPKTPPLVLKHREGPPNMRALFRFGSISRQCRRRNCHLRHYKAPKPATPPSPPTPPKPPKKPQKFEFHGIAWEDPHSWMSNLNDKVAMRHMDVYMEQEEKYTEAIMSETERLQSKLQSEMAARMAFELSTPPLRWGPWLYYRRAEEGKQYPVLCRRLASLNEEFISNKSPSAGFDFASGKRIEQKLLDYNQEAERFGGYAYEELSEISPNHQFIAYTMYDKDNDCFKLSVRNLNSGSLCSKPQADRVSNLAWAKDGQALLYVVTDHRKRPYRIYCSMIGSTDEDFLLLEESDEGVHINIRHTKDFRFVTANTFSIMSSKVFLINAADPLSGMTLVWECDAQAHCIIEHHQGFLYLFTDSPKGGKSADSHYLLRSAVNDFSNPRKWEEVFVDDQNLTVEDVDFCDKYLVLITREGRKFQLCSVSLPLPFGKGAVKLRELDLQYLSLPKHVCQISPGPNYDYFSSVMRFIISSPVMPDAVVDYDLTTGCWNIIQQQNLLQERTRILYGMSSASKNQDLSYSKCSNSLNANVQDDLLWNSLSEFYACEQYDVPSFDGVMVPLTVVFARDNKNKDKGPGLLHGHGAYGELLDKRWHGELKSLLDRGWVISYADVRGGGGFGKKWHHDGRRTKKHNSINDYISCAKFLIERDIVDEGKLAGWGYSAGGLVVASAINHCPDLFRAAILKVPFLDATNTLLYPILPLLPVDYEEFGYPGDLDDFLAIRDYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRDLAIYDPRRPILLNLTADIVEENRYLQSKESALEAAFLIKMMES 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0226 1092 CDD B3_DNA 67 170 IPR003340 GO:0003677
Lele49g0226 1092 ProSiteProfiles B3 DNA-binding domain profile. 79 172 IPR003340 GO:0003677
Lele49g0226 1092 MobiDBLite consensus disorder prediction 332 347 - -
Lele49g0226 1092 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 1021 1043 IPR002470 GO:0004252|GO:0006508
Lele49g0226 1092 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 945 965 IPR002470 GO:0004252|GO:0006508
Lele49g0226 1092 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 861 879 IPR002470 GO:0004252|GO:0006508
Lele49g0226 1092 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 915 934 IPR002470 GO:0004252|GO:0006508
Lele49g0226 1092 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 1003 1018 IPR002470 GO:0004252|GO:0006508
Lele49g0226 1092 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 887 911 IPR002470 GO:0004252|GO:0006508
Lele49g0226 1092 SUPERFAMILY Peptidase/esterase 'gauge' domain 338 782 - -
Lele49g0226 1092 MobiDBLite consensus disorder prediction 276 300 - -
Lele49g0226 1092 SMART B3_2 89 172 IPR003340 GO:0003677
Lele49g0226 1092 MobiDBLite consensus disorder prediction 326 351 - -
Lele49g0226 1092 Gene3D - 416 781 - -
Lele49g0226 1092 SUPERFAMILY alpha/beta-Hydrolases 830 1049 IPR029058 -
Lele49g0226 1092 Pfam B3 DNA binding domain 89 171 IPR003340 GO:0003677
Lele49g0226 1092 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 345 780 IPR023302 GO:0004252
Lele49g0226 1092 Gene3D alpha/beta hydrolase 782 1092 IPR029058 -
Lele49g0226 1092 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 326 1090 - -
Lele49g0226 1092 Gene3D - 60 174 IPR015300 -
Lele49g0226 1092 SUPERFAMILY DNA-binding pseudobarrel domain 93 174 IPR015300 -
Lele49g0226 1092 Pfam Prolyl oligopeptidase family 882 1048 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0226 Lele-ChrLele49 1333591 1339827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0226 41 184 REM Transcription Factor Family AT4G33280 38.356 8.26e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele49g0226 Peptidase_S9_N 1.7e-37 CL0186