Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0222 ATGACCAGCCCTGCAAGTGGGAAAGCTCGAACAATTCTTCCATTTGCCTTCCCGTCTTTTAAGCTTGAAGAAGCTAATGATTTCCCTGAACTGCTCAAATACCGGTTCAATTTGCATCCAACAAAAATGTTTCATTACCGGAAAGGTTTCTCTATTCTTATCACCCTCTTCATGATTTACTCAACAAAAGCCGAAAACAAGAGCACATGCCAGACCAGGTGCGGAGAAAACTCCTTGCCGTATCCTTTTGGGTTCTCTGGAGGTTGCCAAATCCAACTGAACTGCAGTCTCAGCAATAACCAAATGCAAATTAGAGAGTTTCTGGTTCACAACGTAACGTCTAGCGGCATATTCATCCATCTTCCTGCGAAATGCAACCGTACCTTGCAATCCATTGAGCCCCTTTTCACTGCGAACTTCGCTCCCACAGAGAACAACAGCCTCCTTGTTCAAAATTGTACATCTGCGCTTGGCGGCTGCGTTATACCCACCTCAAGTTTTATGAGCAATCAGATAAAGTTGGTAGGCTGCGATTACAGAAGTGATAATATAAGTTGCTTAACGCAGAGCCAAGGCCAGGAAGCTTTTGATGTTCTGAGATTCGACGACGTAATCCAAAGTGGGTGTAAATTCTTGTTCTCGTCTTTAGCTGTTGACCAGAGTAAAGAAGACCCAGAGGTTTCGCTCCAGTTTCAGACGGTGGAGCTGGGGTGGTGGCTTGAAGGCCCATGCCAATGCTCTCCCAACGCCAAGTGTACAAATGTCACCGTCGCCGCTGGGAAGTTTGGGTTTCGGTGTCAATGTCTTCAAGGTTATCAAGGAGATGGGTTCTTGAATGGCACCGGCTGCCGGAGATCATCAGTTTCTAAGTGCAACGCTTCGACATTGACCTCTGGAGGATGTGGAGGAGCAGCTAAAGTCGGTGTTCTTGTTGGAGGGATCATTGTTGGAGCTTTGATAATGGCAATTCTGTGTTTCCTGGGTTATTATGTACGACGTCGTTCCTACTGTTTGAAGAAGCAATTGACTGTAAAGCGCCTATTGCGGGAAGCAGCAGGCAACTCCAGCGTTCCTTTCTATCCTTACAAAGATATAGAGAGAGCCACTAATTTTTTCTCAGAGAAACAGAGGCTTGGAACCGGGGCTTTTGGTACGGTTTATTCAGGAAAACTCCACAATGATGATTTGGTTGCCATAAAAAAAATAAGACAGAGAGACCCCAATGGTGTTGACCAAGTCATGAATGAAATCAAGCTCCTTTCTTCTGTGAGTCACCCGAATTTAGTTCGTCTACTCGGCTGCTGCATTGAAGAGGATGAACAAATACTTGTGTATGAGTTTATGCCCAATGGAACTCTGTCTCAGCATTTACAGAGGGAGAACGGTAAAGGGCTTCCATGGACAATTCGGCTCACTATCGCCTCTGAAACTGCTAATGCAATAGCACATCTCCATTCCGCCATTGATCCTCCAATCTATCACAGAGACATAAAATCAAGCAATATTTTGTTGGATTACAACTTCAACTCGAAAGTAGCAGACTTTGGGCTTTCCAGGCTTGGCATGACCGAAATATCACATATCTCAACCGCCCCGCAAGGGACTCCAGGCTACGTGGATCCTCAGTATCACCAGAACTACCATCTTTCTGATAAGAGTGATGTTTACAGTTTTGGAGTGGTTTTAATAGAGATAATATCAGCCCTGAAAGTGGTTGATTTTGGTCGACCTCATAACGAGGTTAATTTGGCTGCACTCGCAGTTGATAGAATCAGGAGGGGCTGTGTGGACGAGATCATTGATCCCTTCCTAGAGCCACACAGGGATGCTTGGACTCTCTATTCTATACACAAAGTGGCCGAGCTTGCATTCAGATGCTTAGCTTTCCACAGCGACACGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACACATTAGACGCAGTGGGTGGGCAACAATGGAGGAAACCATATGCATGGCATCACCATCGGTTGGGTCGGCACGTTCATCATTACCAGATGATGAAAGTGAGAAACCATTTAGTGAAGTTGGAGTTAATAAAGAAGGAGCAGAGAGTGAGAGAGTGATTGTTGCAGAGAGGGCAGAGGTGAGGGATAGCTCCCCTGTTTCCGTGCATGACCCTTGGTCAAGTGGACATAGCTCGCCTTCATCGAATAGCTTGTTGGGAAATGCAGCTCCATGA 2208 0.4592 MTSPASGKARTILPFAFPSFKLEEANDFPELLKYRFNLHPTKMFHYRKGFSILITLFMIYSTKAENKSTCQTRCGENSLPYPFGFSGGCQIQLNCSLSNNQMQIREFLVHNVTSSGIFIHLPAKCNRTLQSIEPLFTANFAPTENNSLLVQNCTSALGGCVIPTSSFMSNQIKLVGCDYRSDNISCLTQSQGQEAFDVLRFDDVIQSGCKFLFSSLAVDQSKEDPEVSLQFQTVELGWWLEGPCQCSPNAKCTNVTVAAGKFGFRCQCLQGYQGDGFLNGTGCRRSSVSKCNASTLTSGGCGGAAKVGVLVGGIIVGALIMAILCFLGYYVRRRSYCLKKQLTVKRLLREAAGNSSVPFYPYKDIERATNFFSEKQRLGTGAFGTVYSGKLHNDDLVAIKKIRQRDPNGVDQVMNEIKLLSSVSHPNLVRLLGCCIEEDEQILVYEFMPNGTLSQHLQRENGKGLPWTIRLTIASETANAIAHLHSAIDPPIYHRDIKSSNILLDYNFNSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLIEIISALKVVDFGRPHNEVNLAALAVDRIRRGCVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDTRPTMMEVAEELEHIRRSGWATMEETICMASPSVGSARSSLPDDESEKPFSEVGVNKEGAESERVIVAERAEVRDSSPVSVHDPWSSGHSSPSSNSLLGNAAP 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0222 735 FunFam Wall-associated receptor kinase-like 14 339 447 - -
Lele49g0222 735 Pfam Protein kinase domain 372 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0222 735 SUPERFAMILY Protein kinase-like (PK-like) 354 645 IPR011009 -
Lele49g0222 735 ProSitePatterns Protein kinases ATP-binding region signature. 378 401 IPR017441 GO:0005524
Lele49g0222 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Lele49g0222 735 Gene3D Transferase(Phosphotransferase) domain 1 448 661 - -
Lele49g0222 735 FunFam Wall-associated receptor kinase-like 20 448 657 - -
Lele49g0222 735 Gene3D Phosphorylase Kinase; domain 1 334 447 - -
Lele49g0222 735 Gene3D Laminin 244 279 - -
Lele49g0222 735 MobiDBLite consensus disorder prediction 673 709 - -
Lele49g0222 735 MobiDBLite consensus disorder prediction 712 735 - -
Lele49g0222 735 MobiDBLite consensus disorder prediction 664 735 - -
Lele49g0222 735 SMART serkin_6 372 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0222 735 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 53 722 IPR044652 GO:0004672
Lele49g0222 735 ProSiteProfiles Protein kinase domain profile. 372 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0222 Lele-ChrLele49 1308469 1312180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0222 34 732 Receptor kinase-like Gene Family AT2G23450 54.103 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele49g0222 Pkinase 2.4e-44 CL0016