Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0205 ATGTCCATTTCAGACGGTCCTGAGAACCGAGACTGGGAAGGTGACGGCATGGGAAGTTGGATTGTACATCAAGGAATTTGCATGGGACCTCATCGCAATGGACAGGGTATTTTGGTTTTGAGGAGGGATATCCCATGGGAGACGTACATGAGCACTAAGTTGATCTCAGGCACAAGTCTTCAGCTCTTAAGGCGTTATGATCACAAATCACAAAGTCAAAGAGCACAACTGTTGGATGATGATGGTCCAGCTTATGTACGTGTATTTGTTCATGTTTTGCGTGATATACATAAAGATGAGACAGTGGAATTTGTTCTGGCCTTAATAGATGAAATGCTTACAGCAAATCCAAAAAGAGCAAGGCTGTTTCATGATAAGTCCCTTTCAGATGATGATGCCTATGAACCTTTCTTAAATTGCTTTGGAAAGGAAATTGGTTCATACAATAGAAAAGTGCTGAGGAACCCTACTCATCCTAGTCGTGGTGTGCCAACTGCTATCAACTGTTTATCAACTCTTCTTAAGGAACCTATGGTTAGATCTTCCTTTGTTCAGGCAGGTGGGGTCAAGTTGCTTGTACCTTTGATTTCTCCAGCATCCACCCAACAGTCTATTCAGGTTGTTAGAGTAGTAATCTTAACTATGAAGAACTTGCTGTCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTCCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAGGCATGGAGTGATGAGGCGCTGAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGTTCTTATGACAAATATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCTATATTTTGGCGAGAAAATATTACCAACTTTGAAGAAAATGACTTTCAGATTTTAAGAGTCCTACTAACAATTTTAGACACGTCGGGTGATCCAAGAAGTCTGGCTGTTGCATGCTTTGACCTTTCACAATTCGTCCAACATCATCCTGCTGGGAGGATCATAGTGACAGACCTTAAAGCCAAGGAACGGGTAATGAAACTAATGAATCATGAGAACGCTGAGGTCACTAAAAATGCATTGCTCTGCATCCAAAGGCTCTTCTTAGGCGCCAAGTATGCAAGCTTTTTGCAGGCTTAG 1161 0.4212 MSISDGPENRDWEGDGMGSWIVHQGICMGPHRNGQGILVLRRDIPWETYMSTKLISGTSLQLLRRYDHKSQSQRAQLLDDDGPAYVRVFVHVLRDIHKDETVEFVLALIDEMLTANPKRARLFHDKSLSDDDAYEPFLNCFGKEIGSYNRKVLRNPTHPSRGVPTAINCLSTLLKEPMVRSSFVQAGGVKLLVPLISPASTQQSIQVVRVVILTMKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEALNYLEEGLKDNIKKLSSYDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLLTILDTSGDPRSLAVACFDLSQFVQHHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0205 386 Pfam V-ATPase subunit H 205 251 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lele49g0205 386 Pfam V-ATPase subunit H 40 140 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lele49g0205 386 Gene3D - 277 378 IPR038497 -
Lele49g0205 386 Pfam V-ATPase subunit H 263 375 IPR011987 GO:0000221|GO:1902600
Lele49g0205 386 SUPERFAMILY ARM repeat 39 376 IPR016024 -
Lele49g0205 386 Gene3D - 38 146 IPR011989 -
Lele49g0205 386 Gene3D - 206 265 IPR011989 -
Lele49g0205 386 FunFam V-type proton ATPase subunit H 277 378 - -
Lele49g0205 386 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 153 207 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0205 Lele-ChrLele49 1208579 1214354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0205 39 386 Primary Pumps ATPases(2) AT3G42050 63.805 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0205 49 1208579 1214354 Lele51g0220 51 1224789 1230588 hybridization
Lele49g0205 49 1208579 1214354 Lele52g0222 52 1304938 1312338 hybridization