Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0202 ATGGATGCCCTGCAAACACTTACGAGCCTTGCTTATGCATTCGACGCCTCGGTTTCCACATCTCTCGCCTCCAAATCTAGCAGTGCCCAAGCTGCCTTTCAATGGGGTGGAACCATCTTCGATTTGTTTTTGTTGATCCTGAATCGATTTGGACAGGACTCACGCGCACAAAGTACCCTTTTAGTGTTATATCTCTTCATAAGTTTACCAGAAGTGCTGTTCAAAATTTTAAGGGAACAATTTGGCTGCTGGGTTGCTTTCCTTGCAATTGTAGCAAACATGTTTTTCCCTCACACTTCTCCAGTTCCAGTTTCGCGTTTTCTGCTATTTGTGATAGCTCCAAATTTGATTGCTCATGGACTAAGAAATAGCATGGTAGGTGGAGTTTTTTGTTTGGCAATAGGTATCGCAGTTGTCATAATTGAGATTCGTGGAAATGGGGGATTGCGAAACTGCAGCTGTAATTTCCGCTGCTTCGCCTATTATCTTTGTGTAGCATTTCTCTTCTGCTTCACTATATTATACCTGTGCCTAGGAAATTGGTAG 546 0.4286 MDALQTLTSLAYAFDASVSTSLASKSSSAQAAFQWGGTIFDLFLLILNRFGQDSRAQSTLLVLYLFISLPEVLFKILREQFGCWVAFLAIVANMFFPHTSPVPVSRFLLFVIAPNLIAHGLRNSMVGGVFCLAIGIAVVIIEIRGNGGLRNCSCNFRCFAYYLCVAFLFCFTILYLCLGNW 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0202 181 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 18 178 IPR008892 GO:0016020
Lele49g0202 181 Pfam Cold acclimation protein WCOR413 19 153 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0202 Lele-ChrLele49 1202644 1204562 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0202 49 1202644 1204562 Lele51g0219 51 1218738 1223844 hybridization
Lele49g0202 49 1202644 1204562 Lele52g0221 52 1301592 1303469 hybridization